Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3208 ATGCCGACCTTTACTGCCATAGCATTTGATAGGTTGATAGAGCCTGGTGCATCCAAACCTGCTGCTCGTAGATCTGCTTCGACCTCCATGCCGGGCCCCAACGCGAGGAAGCTCGGGAGGAGAACCAGTGAACCGACTGCCCCGTCTGTAAGTAAGAAGCCACCTCCTCGTCCTCAGTTAAAGCCGTCGCTCTATGCCACTCCTGAGGTGACGCCGCTTCCGGATGCACCCTCTTCGTTCCCGCCTTCGCCGTACATTGTCAACCACAAACGTCGTGGCCCGCGCCTCCTCAAGAGTTTCTCTGAGGCGGATGTACAGGCCAAACAGGAGGTTCATGAGGATGAAAATGTTAATAGTAAGAGCTCTGATACTGTGGTTTCCAGTTCTGCTGGTGACCTCCAAGTTACTGTCATGAACGCTGAACCTGTTAATGAAGAGCAAGTAACTGGTGCACTTGATACCAAACTTAGTAGCTGCAATGGCAGTGACCTGGAGCATGGGTGCAGGGAAAATGAACTTAGTAGTAGCATTACTAATGGAACGCATGTGGAAAAGGTAGGGGCGCTGAATTCTGAAAGGGATGTTGAGAGTGATGATTTTTTTGATCCGCAAGATTCAATGAGTGTAACAAGTTACACAGATGGAGAGGATAATACAGGCACAGAACGCGGTGTTAAATTAAGCACTCCTGGTGGGGAGTTCTTTGATGCTTGGGAAGAACTTTCTTCTGATGGCGGGACTCAAAATTCTCTCCGTGATGTTGATGCTGAACTGCGTGAAATAAGGTTGAGTCTATTGTTGGAGATAGAGAAACGAAAGCAAGTTGAAGAATCCCTAAACAGCATGCGAAGCCAGTGGGAGAGAATTAGAAAAGAGTTCTCTCTTGTGGGAATTGTTTTGCCTGCAGATCTTACTGCTATTGCGGACGGTGAGCAGCTGAGTTCTGATTCTGTGGATGATATACGTCAGCAAGTTCACACTGCTAGGTTTATATCCAACGCCATTGGGAGAGGAACTGCCAGAGCTGAGGTGGAGATGGAGATGGAAGCTCAATTAGAGTCAAAGAACTTTGAGATTTCTCGACTATTGGAACGTCTCCATTGTTATGAGACCATGAACAGGGAGATGTCTCAGAGGAATCAGGAAGCAGTAGAGATGGCACGGCGTGAGAGACAAAGAACGATTAGGAGGCAGAGGTGGATTTGGGGCTCTGTTACTACTGCCATTGTACTTGGTACTGCAGCAATAGCATGGTCTTATCTCCCGACGGGTAAAGGATCAACATCTACGGACCATGATATGGCTTCTGAACATGATGATGGAGCCAACTAA 1332 0.4797 MPTFTAIAFDRLIEPGASKPAARRSASTSMPGPNARKLGRRTSEPTAPSVSKKPPPRPQLKPSLYATPEVTPLPDAPSSFPPSPYIVNHKRRGPRLLKSFSEADVQAKQEVHEDENVNSKSSDTVVSSSAGDLQVTVMNAEPVNEEQVTGALDTKLSSCNGSDLEHGCRENELSSSITNGTHVEKVGALNSERDVESDDFFDPQDSMSVTSYTDGEDNTGTERGVKLSTPGGEFFDAWEELSSDGGTQNSLRDVDAELREIRLSLLLEIEKRKQVEESLNSMRSQWERIRKEFSLVGIVLPADLTAIADGEQLSSDSVDDIRQQVHTARFISNAIGRGTARAEVEMEMEAQLESKNFEISRLLERLHCYETMNREMSQRNQEAVEMARRERQRTIRRQRWIWGSVTTAIVLGTAAIAWSYLPTGKGSTSTDHDMASEHDDGAN* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3208 443 Coils Coil 272 292 - -
Lja4g3208 443 MobiDBLite consensus disorder prediction 194 228 - -
Lja4g3208 443 Coils Coil 373 393 - -
Lja4g3208 443 PANTHER PROTEIN, PUTATIVE-RELATED 1 443 - -
Lja4g3208 443 MobiDBLite consensus disorder prediction 14 84 - -
Lja4g3208 443 MobiDBLite consensus disorder prediction 203 225 - -
Lja4g3208 443 MobiDBLite consensus disorder prediction 106 129 - -
Lja4g3208 443 PANTHER BACTERIOPHAGE N4 ADSORPTION B PROTEIN 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3208 Lja-Chr4 60630881 60636333 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3208 - - gmx:100798468 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3208 4 60630881 60636333 Lja4g3208 4 60630881 60636333 ECH
Lja2g0486 2 4405677 4409344 Lja4g3208 4 60630881 60636333 PCT