Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3204 ATGGAAGTAGCACAAGTACTACACATGAATGGAGGTTCTGGAAAAGCAAGCTATGCAAACAACTCCATACTTCAGCAAAATGTAATTTCCTTGACAAAACCCATCATAGAGGAAGGCATAACCAGTCTCTTCTACAACATGCTCCCAACAAGCTTGGCAATTGCAGACTTAGGTTGCTCTTCTGGACCAAATACTTTTTTTGCAGTGTCAGAAATTATCAAGGCTGTGGAGAAGCTCTGTCAAGAGTTGAACCATAAATCTCCTGAATATAATGTCTTTTTCAATGACCTTCCCGGGAACGACTTCAACAACATCTTCAAGTCCCTTGACAACTTCAAAGGGAAATTACATGATGAAATGGAATCTAGGATTGGTCCATGCTATTTCTTTGGAGTTCCAGGTTCTTTCCATGGGAGGATTTTTCCTAGTCGAAGTTTGCATTTTGTTCATTCCTCTTACAGCCTTCAATGGCTATCTAAGGTTCCTGAGGGTATAAACAACAATAAGGGCAACATTTACATTGGCAGCACAAGCCCCTCAAACGTTTACAAGGCTTACTACAAGCAATTTCAAAGTGATTTCTCTTATTTTCTCAAGTGTCGAGCAAATGAACTAGTGGAAGGAGGACACATGGTTCTAACATTTGCGGGAAGAAGAAGCAACGATCCACAGAGCAAGGAGTGTTGCTTCATTTGGGAGCTTATGGCTACGGCTCTTAATGATATGGTCTCGCAGGGAATCATAAAGGAAGAGCAAGTGGATACTTTCAACATTCCTCAATATAATCCATCCTTGTCTGAAGTAAAATTAGAAGTTATAAATGAAGGTTCATTTGTCATCAATCGCATGGAGGTGTCTGATGTGAATTGGAGCACTTTAGGGAACCAGAATAATGATTTTTATTTTGAATCTAAAATATCTAAGCAACTCAGTGAGGGTGGATACAATGTTGCACGGTGCATGAGGGCTGTGGCTGAACCATTGTTGGTTAGCCACTTTGGTGATGCTATCATTGAAGAAGTTTTTACTCGTTACAAAGAAATCTTGGCTAATCGGATGTCGAAGGAAAATAGTTTCATCAACGTTACTATTTTATTGACTAGAAAAGCATGA 1113 0.3962 MEVAQVLHMNGGSGKASYANNSILQQNVISLTKPIIEEGITSLFYNMLPTSLAIADLGCSSGPNTFFAVSEIIKAVEKLCQELNHKSPEYNVFFNDLPGNDFNNIFKSLDNFKGKLHDEMESRIGPCYFFGVPGSFHGRIFPSRSLHFVHSSYSLQWLSKVPEGINNNKGNIYIGSTSPSNVYKAYYKQFQSDFSYFLKCRANELVEGGHMVLTFAGRRSNDPQSKECCFIWELMATALNDMVSQGIIKEEQVDTFNIPQYNPSLSEVKLEVINEGSFVINRMEVSDVNWSTLGNQNNDFYFESKISKQLSEGGYNVARCMRAVAEPLLVSHFGDAIIEEVFTRYKEILANRMSKENSFINVTILLTRKA* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3204 370 PANTHER SAM DEPENDENT CARBOXYL METHYLTRANSFERASE-RELATED 1 368 - -
Lja4g3204 370 Pfam SAM dependent carboxyl methyltransferase 45 368 IPR005299 GO:0008168
Lja4g3204 370 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 1 368 IPR005299 GO:0008168
Lja4g3204 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 368 IPR029063 -
Lja4g3204 370 Gene3D Vaccinia Virus protein VP39 21 357 IPR029063 -
Lja4g3204 370 Gene3D - 6 356 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3204 Lja-Chr4 60586611 60588897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3204 K21483 - gmx:100813166 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3204 4 60586611 60588897 Lja4g3204 4 60586611 60588897 ECH