Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3203 ATGGCTCACGAAAACCACACCTCAACCCTTCGCGTTCTCTGCATCGGAACCCTCGACACCAAGCTCGACGAGCTCCGTTTCCTCTCCGATTCCCTCCGTTCCAATCTCCACCGCTTCACCCACCACTCCTCGCCCAATCTCCAACTCGTCCTCGTCGATGTTTCCACCGGCCCAAACGCGCCACCACAACAACCTTCACCAAACTTCACATTCGTTTCCAGAAACGATGTCCTCTCTTGTCACCTCTCATCCTCGCATCTTCTTCCAGAAGACAGAGGCGAAGCCGTTGCTGTCATGAGCCAAGCGCTGGAGAATTTCCTGAATGAATCATCTCACGACATCGCCGGCGTAATCGGCGTCGGTGGCAGCGGAGGGACATCGCTGTTATCATCTCCGTTCAGGTCTCTCCCTCTCGGGATCCCGAAGCTGATTGTGTCAACCGTTGCCAGTGGCCAAACGGAGCCTTATGTGGGAACCTCAGATCTGGTGCTGTTTCCCTCTATTGTGGATGTTGCTGGTGTTAACAGTGTGAGCAGGGTGGTGCTGTCCAGTGCTGCTTCTGCTTTTGCTGGAATGGTTGTTGGAAGGGTTCAGAGCTTGAAGGATTTGGATTCGAGAGGTGAAGATTGTAAGCCCACTGTTGGTTTAACTATGTTTGGGGTTACCACTAGTTGTGTCAATGCGGTGAGGGATCGGTTGCGTGATGAAGGGTATGAGAGCCTGGTTTTTCATGCAACTGGGGTTGGTGGTAGGGCTATGGAGGATTTGGTTAGACAGGGATTTATCCAGGGTGTTTTTGACATCACAACAACAGAGGTAGCAGACCACATTGTTGGAGGTGTAATGGCTTGTGACGGTTCTCGCTTTGATGCCATCATAGAGAAGAAAATCCCCCTGGTTCTGAGTGTGGGAGCATTGGACATGGTGAATTTCGGAGCAAAAGATACTGTACCGCAGGAATTTCAGCAGAGAAATATATATGAACATAATAAGCAGGTTTCGCTCATGCGAACAACAGCTGATGAGAACAGAAGATTTGCTGATTTCATAGCAAAAAAACTGAACAATTCATCATCTAAAATTCGTGTTTGCCTTCCAGAAAAGGGTATATCTGCTTTAGATGCACCGGGTAAGCCCTTTTATGATCCAGAGGCAACGGGTACACTTATTCATGAATTACAAAGGCTTGTTCAGACTGATGATAATCGAAAGGTAAAAGTGTATCCACATCATATTAATGACCTTGAATTTGCAAATGCATTGGTTGATGCGTTCTTAGAGATTGATGAGACAACTAGTAAAGATTCTACTCATTCACCTGTAGCCAGTCCTGAATCTGTAGTACACTTTCATGAGGATTATATTTCAAATGCATCAAGCTCTGGGACCATTGTCTATGCACCTAGTGACTTCCCAAATGCAAGACCAGAAACTTTGGAGAAAACACAGCTAATATTGCAACAATTGAAACATCAAATAGATAAAGGAATTCCTATAATAGGAGCTGGTGCTGGGACAGGTATATCTGCCAAGTTTGAAGAAGTTGGAGGTGTAGATCTAATAGTACTGTACAACTCAGGGCGCTTCCGGATGGCTGGAAGAGGTTCATTAGCAGGGTTATTACCTTTTGCTGATGCTAATGCTGTTGTGCTCGACATGGCCAATGAAGTTTTACCGGTGGTAAAGAAGGTACCAGTTCTTGGTGGTGTATGTGCAACTGATCCCTTCCGTCGAATGGAGTACTTCCTTAAACAGGTGGAGTCTACTGGATTCTCTGGGGTACAAAATTTTCCAACTGTTGGGTTATTTGATGGTAATTTTAGACAAAACCTTGAAGAAACAGGAATGGGATATAGCTTGGAAGTTGAGATGATTCGAAAAGCACATAACATGGGTCTCTTAACAACCCCATATGCATTCAATCAACATGAAGCAATTGAAATGGCTAAAGCTGGCGCTGATATTATAGTGGCCCATATGGGTCTAACAACAACAGGCTCCATAGGCGCAAAAACAGCTGTTTCACTTGAGGAAAGTGTCGTGCGTGTACAAGCTATTGCAGATGCAGCACATAGAATCAACCCCAATGCCATTGTGCTGTGTCATGGAGGTCCGATATCGGGTCCAGAAGAGGCGGAATTTATATTGAAGAGAACCAAGGGAGTTCATGGATTTTATGGAGCATCAAGCATGGAAAGACTACCAGTGGAACAGGCTATCACAAGTACAGTCAAACAGTACAAGTCAATTTTTATTTGTTGA 2262 0.454 MAHENHTSTLRVLCIGTLDTKLDELRFLSDSLRSNLHRFTHHSSPNLQLVLVDVSTGPNAPPQQPSPNFTFVSRNDVLSCHLSSSHLLPEDRGEAVAVMSQALENFLNESSHDIAGVIGVGGSGGTSLLSSPFRSLPLGIPKLIVSTVASGQTEPYVGTSDLVLFPSIVDVAGVNSVSRVVLSSAASAFAGMVVGRVQSLKDLDSRGEDCKPTVGLTMFGVTTSCVNAVRDRLRDEGYESLVFHATGVGGRAMEDLVRQGFIQGVFDITTTEVADHIVGGVMACDGSRFDAIIEKKIPLVLSVGALDMVNFGAKDTVPQEFQQRNIYEHNKQVSLMRTTADENRRFADFIAKKLNNSSSKIRVCLPEKGISALDAPGKPFYDPEATGTLIHELQRLVQTDDNRKVKVYPHHINDLEFANALVDAFLEIDETTSKDSTHSPVASPESVVHFHEDYISNASSSGTIVYAPSDFPNARPETLEKTQLILQQLKHQIDKGIPIIGAGAGTGISAKFEEVGGVDLIVLYNSGRFRMAGRGSLAGLLPFADANAVVLDMANEVLPVVKKVPVLGGVCATDPFRRMEYFLKQVESTGFSGVQNFPTVGLFDGNFRQNLEETGMGYSLEVEMIRKAHNMGLLTTPYAFNQHEAIEMAKAGADIIVAHMGLTTTGSIGAKTAVSLEESVVRVQAIADAAHRINPNAIVLCHGGPISGPEEAEFILKRTKGVHGFYGASSMERLPVEQAITSTVKQYKSIFIC* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3203 753 CDD Tm-1-like 11 428 IPR044122 -
Lja4g3203 753 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 483 673 IPR015813 GO:0003824
Lja4g3203 753 PANTHER UPF0261 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_1G10120) 10 752 - -
Lja4g3203 753 Gene3D Uncharacterised protein family UPF0261, NC domain 211 431 - -
Lja4g3203 753 Pfam Uncharacterised protein family (UPF0261) 11 428 IPR044122 -
Lja4g3203 753 Gene3D Aldolase class I 477 728 IPR013785 -
Lja4g3203 753 Pfam Phosphoenolpyruvate hydrolase-like 485 750 IPR009215 -
Lja4g3203 753 Gene3D Uncharacterised protein family UPF0261, NN domain 3 199 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3203 - - lja:Lj4g3v0985590.2 1307.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3203 4 60580320 60584633 Lja4g3203 4 60580320 60584633 ECH