Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3194 ATGGGGAGTGAGATTGAGAGTCCAGAAATGGATGAATGGCGTTTCACATGGGAATCACAGTCCCAAACCCCAACGCTTCGCTTACTCCTTCTCTTCCCCAAAACCCTCCTTCCTCCTCCCTCTCTCCAAACCGTTCGCCTTCACTCCTCACACTCTTTCCTCCTCATCTCCCTCTCCTCCGCCGTTGTCTCCCTTAGGGTTCCGATTCCGGCAAGAGTCTTACTCGACGCCGACGCTCCTCCTACCTTCCGCGCACTCTCCGACCACATCGAGGTCAAGCTCCTCCTCCTCCTCCCCCTCCACCACCCTATCCTCTCCGCCCTCTCTCCTCACCCTTCCTCCCGCCCTCTCCCAATGGATTCCGATGTTGAAAATTTGGCTTCTCATGGAGAAGTTGATTTTTACTGTAGAACTTGCGCTTTCAAGTTGACCAAACATCCACTCAGGAATTTTGTTGAAATGCCATCAGCGAATTGGAGGGAGGTGGCTGACAATTGGTTCGGGGCTTGTTGTTGTTCGTTTGGGGGTGTAAGCGAGAAGCTGGTTTTGAGGTATGTGAATTCTCACACGTGCGCGCCGGGGATTTGCCTTTTGAGTCCTGCGTCTGTCATTCTTTGTAAGGATGATCTTGTGGAGTGTAATTTACATGCTGAAGGGTGTGGACAGCGAGAGTGTGGTTCTAAAGCAGATAACCTTGGAGATGATGATGTTGTTGGCGATGGCAAGGCAAGTTTTGGATTGAATGAGGAAAGAACTTCAACCTGCGCTGATGCTGGTGAAGTAGCCTGTGCTTTTGAGGATAAGTTAAGGCTTGTGCATCCTGAGAATGAAAAGCTCTCTATGAATTTTAGAGGTGAAGGCAATGACTTCTCTCATTCATGTACAGATTCTAATGGTGCTGAAGATGTGGCTAACACTCCTAGTTGTTGTGCTCATTCGATGGGCATTATCGGGGATGAAGACGGTGAACATCATTTATCTGGGACTGCTAGAAAGACAGAAACTATTGAAATCAGGGAAAATCAGAAGCCTCTCCTCAATGGTTTTCTTGAAGATGTTTTCATGGCTAGATTATCAAATCTTTCAAAGGATATTGATTGGCATGAATTCACATGCCCTCAATGCATGTCTCTCCTTGGAGCCTACCCATGTTGTGAGGGCTATGCACCTGTAGATGGTGGAGTAAGGTTGTTCAAATGCTATATTTCAACCTGTGTGCCAGTTGGAGGATCAGAGGACATTTTCAGCGAGTACACAATGGACAAAATGTTTGCAAATCAGTTGATGGGGTGTGCAACCGATGAATCATCATTCCGGTTTGTTGTTAGAGATCTGGCAACCAAATCCCCTGTCCTGCAAATCATTCTTTTAAATCCAGATACTTGGTCCTGTTCTGGTAATTGTTCTGTTGTTGAGGACGAAGACCCAGTTCCTAAATTACAGCTACGGCCCATCATCAAGGTGCTTTTTTCTGATTTTAGAGCTGCAACTGAATCTCAATTAAGGATGATAGAAGAATGGGCAACAAAGAATTCAGCTGAAATTTTTTTCATGTTATCTCGTCAAATACAAGATTTGATGGGGTCGTTGATGACAGCAAAAGATATATACCCACCTTCATATGCTTCCTATCAAGGATTAATCTTGTCGTCTGTGCATCAGTAG 1665 0.4577 MGSEIESPEMDEWRFTWESQSQTPTLRLLLLFPKTLLPPPSLQTVRLHSSHSFLLISLSSAVVSLRVPIPARVLLDADAPPTFRALSDHIEVKLLLLLPLHHPILSALSPHPSSRPLPMDSDVENLASHGEVDFYCRTCAFKLTKHPLRNFVEMPSANWREVADNWFGACCCSFGGVSEKLVLRYVNSHTCAPGICLLSPASVILCKDDLVECNLHAEGCGQRECGSKADNLGDDDVVGDGKASFGLNEERTSTCADAGEVACAFEDKLRLVHPENEKLSMNFRGEGNDFSHSCTDSNGAEDVANTPSCCAHSMGIIGDEDGEHHLSGTARKTETIEIRENQKPLLNGFLEDVFMARLSNLSKDIDWHEFTCPQCMSLLGAYPCCEGYAPVDGGVRLFKCYISTCVPVGGSEDIFSEYTMDKMFANQLMGCATDESSFRFVVRDLATKSPVLQIILLNPDTWSCSGNCSVVEDEDPVPKLQLRPIIKVLFSDFRAATESQLRMIEEWATKNSAEIFFMLSRQIQDLMGSLMTAKDIYPPSYASYQGLILSSVHQ* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3194 554 PANTHER E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER 14 551 IPR019193 -
Lja4g3194 554 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 41 544 IPR019193 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3194 Lja-Chr4 60397391 60401563 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3194 - - gmx:100791241 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3194 4 60397391 60401563 Lja4g3194 4 60397391 60401563 ECH