Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3191 ATGAGGTTCACACACTTCTCACTTCTCCGCAAAACCCTAACACAAAACCCTAAATTCCCTTCTTCTCCTTCGATTCCGCGATTCGCACCAAACAACCAGTCATCGAATTCGAAATCGCAACAATGTCGTTCCCTCTTCGCGCGCAATTGCAGCACCGCCACGCCGGAGAAAGTGTCGGCGATCGTGGACGAGCTCACGGGGTTGACGCTGCTGGAGGTGATGGACCTGGTTGAAGTGATGCGGGAGAAGAAGGGGATCAATGAGCTTCCAATTGCGATGCTGATGGTGCCTGGAATGGGGATTAGGGGTTTGCCGAAGGGTGCGGCGAAGGGTGGTGGTGGTGGAGGAGGAGGGCAAGAAGAGGAGAAGAAGGCTGAGAAAACGGCTTTTGATGTGAAGCTTGATGCGTTTGATGCGGCGTCGAAGATTAAGGTGATTAAGGAAGTGAGGACGTTTACTAGCTTGGGGTTGAAGGAAGCTAAGGATTTGGTGGAGAAGGTGCCTACGGTTTTGAAGAAAGGTGTGACCAAGGAGGAAGCTGAGGCTATTATTGCCAAGCTGAAGGACGTTGGCGCCAAAGCTTCGATGGAATGA 594 0.5202 MRFTHFSLLRKTLTQNPKFPSSPSIPRFAPNNQSSNSKSQQCRSLFARNCSTATPEKVSAIVDELTGLTLLEVMDLVEVMREKKGINELPIAMLMVPGMGIRGLPKGAAKGGGGGGGGQEEEKKAEKTAFDVKLDAFDAASKIKVIKEVRTFTSLGLKEAKDLVEKVPTVLKKGVTKEEAEAIIAKLKDVGAKASME* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3191 197 PANTHER 39S RIBOSOMAL PROTEIN L12 34 197 IPR000206 GO:0003735|GO:0005840|GO:0006412
Lja4g3191 197 MobiDBLite consensus disorder prediction 15 40 - -
Lja4g3191 197 Hamap 50S ribosomal protein L7/L12 [rplL]. 53 197 IPR000206 GO:0003735|GO:0005840|GO:0006412
Lja4g3191 197 Gene3D - 127 196 IPR014719 -
Lja4g3191 197 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 57 132 IPR036235 GO:0003735|GO:0005840|GO:0006412
Lja4g3191 197 CDD Ribosomal_L7_L12 56 196 IPR000206 GO:0003735|GO:0005840|GO:0006412
Lja4g3191 197 SUPERFAMILY ClpS-like 126 196 IPR014719 -
Lja4g3191 197 Pfam Ribosomal protein L7/L12 dimerisation domain 57 99 IPR008932 GO:0003735|GO:0005840|GO:0006412
Lja4g3191 197 Gene3D Single helix bin 57 126 IPR036235 GO:0003735|GO:0005840|GO:0006412
Lja4g3191 197 Pfam Ribosomal protein L7/L12 C-terminal domain 130 196 IPR013823 GO:0003735|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3191 Lja-Chr4 60376833 60378898 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3191 K02935 - gmx:100775592 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3191 4 60376833 60378898 Lja4g3191 4 60376833 60378898 ECH