Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3186 ATGATGATGAGTGAATTAGTGAATCACCAAAGAATCAAAACCAACGGGATATGGATACATGTAGCAGAGCAAGGAACAGGACCACTAGTTCTACTGCTTCATGGCTTCCCAGAAATATGGTACTCATGGCGCCACCAGCTCAACTACTTAGCCCAAAATGGTTATCATGCGGTTGCTCCTGATCTCAGAGGCTACGGTGATTCTGATTCTCCTCTTGACCCCAATTCCTACACTGTTCAGCACATAGTAGGTGATCTTATTGGTCTTCTTGATCATTTTGGTGAACAACAGGCATTTGTGGTTGGTTCTGACTTGGGAGCAAACATTGGATGGAACCTATGTCTGTTTAGACCTGACAGGGTGAAGGGGTTTGTTGCTTTAGGTGTTCCTTACTTGCCAAGATCTCCAACTGCTAAAACGGTTGAAACAATCAGGGAAATATATGGAGATGAGAGTCATGTCTGCCAGTTTCAGGAAGCTGGTCGTGCAGAGAGAGCTTTTGCAAGATATGATTGCTTGACAGTGATGAAGAAGTTTTTGCTGATAACAACAGATTTTCTAGTAGCTCCTCCTGGCGTGGAGATCATTGATTTCTTACCGACGCCTTCGGTTTTGCCATCATGGATCACTGAGGAGGAACTCATGGTGTTTGCAGACAAATTCCAGGAGTCTGGTTTCACTGGTCCACTCAATCACTACCGGGCAATGGACCTAAATTGGGAGCTTCTTGCACCGTGGCAAGGATCAAAGATAATAGTTCCAACGAAGTACATAGCCGGAGACAAAGACATTGGCTTTGAAAAGGGTGGTATGAAGGATTTTGTGGAAAGTGATGTTTTTAAGAGTATTGTTCCCAACCTTGAAACAGTTATACTAGATGGACACCATTTTATACATCAAGAGAAAGCCCAACAAGTTTCAGATGAAATCATTTGCTTCATCAGGAAATTATCTCTGGATTAA 963 0.4299 MMMSELVNHQRIKTNGIWIHVAEQGTGPLVLLLHGFPEIWYSWRHQLNYLAQNGYHAVAPDLRGYGDSDSPLDPNSYTVQHIVGDLIGLLDHFGEQQAFVVGSDLGANIGWNLCLFRPDRVKGFVALGVPYLPRSPTAKTVETIREIYGDESHVCQFQEAGRAERAFARYDCLTVMKKFLLITTDFLVAPPGVEIIDFLPTPSVLPSWITEEELMVFADKFQESGFTGPLNHYRAMDLNWELLAPWQGSKIIVPTKYIAGDKDIGFEKGGMKDFVESDVFKSIVPNLETVILDGHHFIHQEKAQQVSDEIICFIRKLSLD* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3186 320 PRINTS Epoxide hydrolase signature 100 113 IPR000639 GO:0003824
Lja4g3186 320 PRINTS Epoxide hydrolase signature 54 69 IPR000639 GO:0003824
Lja4g3186 320 PRINTS Epoxide hydrolase signature 291 313 IPR000639 GO:0003824
Lja4g3186 320 PRINTS Epoxide hydrolase signature 114 127 IPR000639 GO:0003824
Lja4g3186 320 PRINTS Epoxide hydrolase signature 253 269 IPR000639 GO:0003824
Lja4g3186 320 PRINTS Epoxide hydrolase signature 34 52 IPR000639 GO:0003824
Lja4g3186 320 SUPERFAMILY alpha/beta-Hydrolases 8 316 IPR029058 -
Lja4g3186 320 PANTHER EPOXIDE HYDROLASE 2 318 - -
Lja4g3186 320 PRINTS Alpha/beta hydrolase fold signature 54 69 IPR000073 -
Lja4g3186 320 PRINTS Alpha/beta hydrolase fold signature 100 113 IPR000073 -
Lja4g3186 320 PRINTS Alpha/beta hydrolase fold signature 114 127 IPR000073 -
Lja4g3186 320 Pfam alpha/beta hydrolase fold 28 301 IPR000073 -
Lja4g3186 320 Gene3D alpha/beta hydrolase 5 318 IPR029058 -
Lja4g3186 320 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2 2 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3186 Lja-Chr4 60262514 60265972 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3186 3 318 Acyl Lipid Metabolism Gene Families AT3G51000 65.109 6.01e-155 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3186 - - gmx:100818894 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3186 4 60262514 60265972 Lja4g3186 4 60262514 60265972 ECH