Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3166 ATGGGCGTGATTTGCAAGCGGGTGAAGCAATTAGCTAGATTCGGAGGCTTTAGGGTTTCAAAAGTGCAATCATCATTTGAAAGACCAATTTGCAATCCACTCTCAGCTTCTTCGCCTTCGGTTTCGGGTACCAGGCATATTTCTGAACTGGTGAAATCAAATGGGAAACACTTGTTCCTTGTTGACACATTGGCCCTTGTTAGGAGACTAGAGGGGCAAGGAGTACCCTCAAAGCAAGCTGAGGCAATAACTGCTGCCATAACTGGTGTTTTGAATGACAGTCTTGAGAATGTATCTCAGTCATTGGTGTCAAAAGGAGAAATGCAAAAAACTGAAATGATTCAAGAATCCAACCTGTCCAAATTCAAATCAGAAGTACAGAGCTCCCAGGGACACCATTTTTCTCTGTTGCAACATGAGACTGAAAAGCTTAGGAATGATATAGAGAAGATGCGCAGTGAATTGAGATATGAAATGGATAAGGTCACCGCTGGGCAACGATTGGATATGAACCTTGAAAGGGGGAGAATAAGGGAAGAACTGTCCAACCAGAGTGCTGAAAATAGCAGCCTCACAAACAAACTTGATAGAGAGATCCATTCTTTAAGAGCACAGATGGAAGCAGCCAAATATGATGTCATAAAATACTGCATAGGATCACTTGTTTCAATCTCTGCTGTTGGCCTTGCTGTTATCCGCATATTGATGTAA 711 0.4233 MGVICKRVKQLARFGGFRVSKVQSSFERPICNPLSASSPSVSGTRHISELVKSNGKHLFLVDTLALVRRLEGQGVPSKQAEAITAAITGVLNDSLENVSQSLVSKGEMQKTEMIQESNLSKFKSEVQSSQGHHFSLLQHETEKLRNDIEKMRSELRYEMDKVTAGQRLDMNLERGRIREELSNQSAENSSLTNKLDREIHSLRAQMEAAKYDVIKYCIGSLVSISAVGLAVIRILM* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3166 236 Pfam Coiled-coil domain-containing protein 90-like 61 235 IPR024461 -
Lja4g3166 236 PANTHER FMP32-LIKE PROTEIN 1 236 - -
Lja4g3166 236 Gene3D - 62 163 - -
Lja4g3166 236 Coils Coil 134 154 - -
Lja4g3166 236 PANTHER UNCHARACTERIZED 1 236 IPR024461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3166 Lja-Chr4 59822062 59825744 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3166 - - gmx:100806915 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3166 4 59822062 59825744 Lja4g3166 4 59822062 59825744 ECH