Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3163 ATGAGACAGGGATGGCTGATTTCCACGGCGGCTTCATCGCTCTTCATCTTTCTATCTTTCGCGGCGGTCTCACACGGCCTTGTTCCGCCGCGCACGCTGCTCAATCGCTTGTCTGAAGGCAGATACCTCAACAGCACCGAGCTCTGGTTCAACAATCAGACCCTCGATCACTTCTCACCCTATGATCACCGCCAATTCCGGCAACGTTACTATGAGTTCTTGGACTATTTCCGGATTCCGGATGGGCCAATTTTTTTGGTGATTTGTGGGGAAGGTCCATGCAGTGGGATAGTAAATGACTATATTGGTGTACTGGCAAAGAAGTTTGGAGCAGCTGTGGTGTCTCTTGAACATCGGTATTATGGGAAGACTACCCCATTTGATTCTTTGGCGACAGAAAATTTGAAATATCTTTCGTCCAAGCAGGCACTCTTTGATTTGGCTGTTTTTCGCCAGTATTATCAGGATTCTTTAAATGCAAAGCTGAATAGAAAAGAAATTGAAAATCCCTGGTTCGTATTTGGTGGCTCATATTCTGGGGCACTCAGTGCATGGTTCCGTCTTAAGTTTCCCCATTTAACATGTGGAAGTCTTGCAAGTTCTGCAGTTGTTCTTGCTGTTTATAACTTCACAGAATTTGATCAGCAGGTTGGTGAGTCAGCAGGTGCTGAGTGTAAAGCAGCATTGCAAGAAATTACTCAACTCGTTGAACAGAAACTTGCGACCAACGGAAAGGCAATAAGAGCATCTTTTAATGCAGATCATCTTGAAGTTGATGGTGACTTCATGTATTTGCTGGCTGATGCCGCCGCTATAGCGTTTCAATATGGAAATCCAGATAAATTATGCAAGCCTCTGGTTGAAGCAAAAAAGGCTGGAGAGGATTTGGTGGATGCTTATGCGAAATATGTCAAAGAGTACTACCTTGGAACCTTTGGCGTTAATGTCCTAGATTATGACCAGAACTATCTGAAAAAAACTGCTATTAGTGAAGATAGTTCTACTCGATTATGGTGGTTTCAAGTTTGCACTGAAGTTGCGTACTTTCAGGTTGCTCCCTCAAATGACAGTATACGTTCTTCAAAAATTGACACAAAATATCATTTGGACCTTTGCAAAAATGTTTTTGGAGAGGGTGTCTTTCCTGATGTTGATGCAACTAATTTATACTACGGAGGCACAAAAGTTGCAGGTTCAAAGATAATATTTGCAAATGGCTCCCAGGATCCTTGGCGTCATGCATCCAAACAAACTTCATCCCCTGATTTGCCTTCCTACACCATCACATGTGATAATTGTGGTCATTGTGTCGACATTCGAGGGTGTCCTCAATCTCCTTTGGCTCTTGAAGGGAGTGAGAAGAACTGCTCTTCCCCTGATGCAGTCCACAAAGCAAGGCAAAAGATTCAAGAACATATGGACTTGTGGCTATCTGAGTGCCAACAACAGGACACAGGCAGGAGTTTTATTTGA 1473 0.4345 MRQGWLISTAASSLFIFLSFAAVSHGLVPPRTLLNRLSEGRYLNSTELWFNNQTLDHFSPYDHRQFRQRYYEFLDYFRIPDGPIFLVICGEGPCSGIVNDYIGVLAKKFGAAVVSLEHRYYGKTTPFDSLATENLKYLSSKQALFDLAVFRQYYQDSLNAKLNRKEIENPWFVFGGSYSGALSAWFRLKFPHLTCGSLASSAVVLAVYNFTEFDQQVGESAGAECKAALQEITQLVEQKLATNGKAIRASFNADHLEVDGDFMYLLADAAAIAFQYGNPDKLCKPLVEAKKAGEDLVDAYAKYVKEYYLGTFGVNVLDYDQNYLKKTAISEDSSTRLWWFQVCTEVAYFQVAPSNDSIRSSKIDTKYHLDLCKNVFGEGVFPDVDATNLYYGGTKVAGSKIIFANGSQDPWRHASKQTSSPDLPSYTITCDNCGHCVDIRGCPQSPLALEGSEKNCSSPDAVHKARQKIQEHMDLWLSECQQQDTGRSFI* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3163 490 Gene3D alpha/beta hydrolase 52 476 IPR029058 -
Lja4g3163 490 PANTHER SERINE PROTEASE EDA2-RELATED 15 484 - -
Lja4g3163 490 Pfam Serine carboxypeptidase S28 53 442 IPR008758 GO:0006508|GO:0008236
Lja4g3163 490 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 15 484 - -
Lja4g3163 490 SUPERFAMILY alpha/beta-Hydrolases 72 212 IPR029058 -
Lja4g3163 490 Gene3D Serine carboxypeptidase S28, SKS domain 212 362 IPR042269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3163 Lja-Chr4 59797143 59803206 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3163 - - aprc:113857786 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3163 4 59797143 59803206 Lja4g3163 4 59797143 59803206 ECH