Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3146 ATGAGGAACCGCCACCATCATCTCGTCTCAGTATTCATCATCGTGCTCATTGCATCCCTCTTCGACGATGCTCTCTGCATCCGGTTCCCTGATCGGGTCGCCCAACCCGCCCGCGACCCACCCGATCAACAGCGCCTGCAGACAGCCGTGTTCGCTCTCGGAAGCTTCTGGAGATCCGAAGCGGTTTTCGGGTGCATACCCGGCGTTGTTCGGACCACCGTTGGATACGCCGGCGGATCCAAACCCCACCCTGAATATCGGAGCTTGGCTGATCACGCCGAGTCCGTTCAGGTTGAGTATGACACACGGCTGATTAGTTTTAGGGAACTCATTGATATTTTTTGGTCAAGTCATGATCCCCGACAAGTGTATGGCCAAGGTCCTGATGTGGGTAATCAGTACAGATCTATTATTTTTGTTAATGGAACTGAAGAATCAAGAATGGCTGCTGTTAGCAAAGAACAGGAGCAAACCAGGTCAAGAAGCAGCATTGTGACTACTCAAATTCTACAACTTGGAACATTTTACCCTGCAGAACCAGAGCACCAGAAATTTGAACTCAAGCAAAACACATTCCTTCTTCAGTTAATTGGGAACCTGCCGGAAGAGGAGCTTGAGAGGTCTAGCCTAGCAACAAAACTAAATGGATATGTAGCTGAGCTTTGCCCTCCAAATATCCAAAAGCATATTGATGCAAAGATCAATGAGATTATAAAAAAGGGTTGGCCCATTTTGAGGGAATTGTAA 747 0.4793 MRNRHHHLVSVFIIVLIASLFDDALCIRFPDRVAQPARDPPDQQRLQTAVFALGSFWRSEAVFGCIPGVVRTTVGYAGGSKPHPEYRSLADHAESVQVEYDTRLISFRELIDIFWSSHDPRQVYGQGPDVGNQYRSIIFVNGTEESRMAAVSKEQEQTRSRSSIVTTQILQLGTFYPAEPEHQKFELKQNTFLLQLIGNLPEEELERSSLATKLNGYVAELCPPNIQKHIDAKINEIIKKGWPILREL* 249
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3146 248 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 11 247 - -
Lja4g3146 248 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 48 188 IPR002569 GO:0008113
Lja4g3146 248 SUPERFAMILY Peptide methionine sulfoxide reductase 40 190 IPR036509 GO:0008113
Lja4g3146 248 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE A5 11 247 - -
Lja4g3146 248 Pfam Peptide methionine sulfoxide reductase 48 189 IPR002569 GO:0008113
Lja4g3146 248 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 46 200 IPR002569 GO:0008113
Lja4g3146 248 Gene3D Peptide methionine sulphoxide reductase MsrA 41 242 IPR036509 GO:0008113
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3146 K07304 - gmx:100782739 434.106
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3146 4 59525764 59531516 Lja4g3146 4 59525764 59531516 ECH