Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja4g3141 | ATGGGGGAAGGGAGAGAAGGAGATTGGGAGTGCAGCAGTTGCAACAACCGCAACTACGCTTTCAGATCATTCTGCAATCGATGCAAGCAACCCCGTCTCCTCGTTGATACCAAAACCCCTGCTGATTCCAAGTGGCTCCCTCGTATTGGTGATTGGATCTGCACCGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAGAAGTGTGGACAACCAAAGGAGGTAGCAGCCATGCCAGCAGTTGCAATGACCGGAGCATCTTTCCCCCCTTATCCGCATTATGTTTCCAGGGCTCCAGGAGGACCAGCACAAAAGATGAACATTGGATTCAATGGATTGATCGGAAATGGTGTGCTACCGCAGCCACTGCATTTAAACTCCAATTGGCCTGTTACCGGAGCAGATAAGTATGGTGTCCATCCAGTTTCCATGTGGCTACCTGGTGGAAATTATAGTTCTGGACATCCTTATGTAAACCCCTCCAGCCAGGACCTATCTATTGCGAAAGGATGGCGCAATGGGGACTGGATCTGTAACTGTGGTTTCCATAACTACTCATCACGCTCACAGTGTAAAAAGTGTGATGCTTTTCCACCTGCACTTGGGACAAAACGATTAGCTTCTGAAGAATTGGTTTATGACTGGGACAACAAGAGATTGAATGTAGGAACTACAAATGATCGGCAGCACACATTTACAAGTTTAGAGCAAGCAGTGGGGAACAGCGCAGATCCTAAACCTGGAGTATTCCCTTCTTATCCCGGTATAAACTCAAGTACCGCTCCAAGTTTGCCAATGCCCCAATTGCTTCCACCTCAAGTTTCTACTCCAGCACTCCTTGGAAAAGGAGCGAAGCAATGGCGTAGTGGAGACTGGATGTGCACAAATTGCAACAATCATAATTATGCTTCCAGACTACACTGTAACAGGTGTAAAACCCAACGAGTGGCCCCCATGCAACCCGTCAATGTTGTGTAA | 984 | 0.4736 | MGEGREGDWECSSCNNRNYAFRSFCNRCKQPRLLVDTKTPADSKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAVAMTGASFPPYPHYVSRAPGGPAQKMNIGFNGLIGNGVLPQPLHLNSNWPVTGADKYGVHPVSMWLPGGNYSSGHPYVNPSSQDLSIAKGWRNGDWICNCGFHNYSSRSQCKKCDAFPPALGTKRLASEELVYDWDNKRLNVGTTNDRQHTFTSLEQAVGNSADPKPGVFPSYPGINSSTAPSLPMPQLLPPQVSTPALLGKGAKQWRSGDWMCTNCNNHNYASRLHCNRCKTQRVAPMQPVNVV* | 328 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja4g3141 | 327 | Gene3D | - | 170 | 202 | - | - | |
| Lja4g3141 | 327 | Gene3D | - | 3 | 33 | - | - | |
| Lja4g3141 | 327 | Gene3D | - | 285 | 320 | - | - | |
| Lja4g3141 | 327 | Gene3D | - | 42 | 77 | - | - | |
| Lja4g3141 | 327 | PANTHER | OS04G0110600 PROTEIN | 275 | 326 | - | - | |
| Lja4g3141 | 327 | PANTHER | ZINC FINGER PROTEIN | 275 | 326 | - | - | |
| Lja4g3141 | 327 | PANTHER | OS04G0110600 PROTEIN | 171 | 228 | - | - | |
| Lja4g3141 | 327 | SMART | zf_4 | 7 | 31 | IPR001876 | - | |
| Lja4g3141 | 327 | SMART | zf_4 | 292 | 316 | IPR001876 | - | |
| Lja4g3141 | 327 | SMART | zf_4 | 176 | 199 | IPR001876 | - | |
| Lja4g3141 | 327 | SMART | zf_4 | 50 | 74 | IPR001876 | - | |
| Lja4g3141 | 327 | Pfam | Zn-finger in Ran binding protein and others | 5 | 32 | IPR001876 | - | |
| Lja4g3141 | 327 | Pfam | Zn-finger in Ran binding protein and others | 48 | 76 | IPR001876 | - | |
| Lja4g3141 | 327 | Pfam | Zn-finger in Ran binding protein and others | 290 | 316 | IPR001876 | - | |
| Lja4g3141 | 327 | PANTHER | ZINC FINGER PROTEIN | 171 | 228 | - | - | |
| Lja4g3141 | 327 | ProSitePatterns | Zinc finger RanBP2-type signature. | 294 | 313 | IPR001876 | - | |
| Lja4g3141 | 327 | ProSiteProfiles | Zinc finger RanBP2 type profile. | 290 | 319 | IPR001876 | - | |
| Lja4g3141 | 327 | PANTHER | OS04G0110600 PROTEIN | 3 | 140 | - | - | |
| Lja4g3141 | 327 | ProSitePatterns | Zinc finger RanBP2-type signature. | 52 | 71 | IPR001876 | - | |
| Lja4g3141 | 327 | SUPERFAMILY | Ran binding protein zinc finger-like | 5 | 33 | IPR036443 | - | |
| Lja4g3141 | 327 | SUPERFAMILY | Ran binding protein zinc finger-like | 172 | 199 | IPR036443 | - | |
| Lja4g3141 | 327 | SUPERFAMILY | Ran binding protein zinc finger-like | 42 | 76 | IPR036443 | - | |
| Lja4g3141 | 327 | ProSiteProfiles | Zinc finger RanBP2 type profile. | 48 | 77 | IPR001876 | - | |
| Lja4g3141 | 327 | PANTHER | ZINC FINGER PROTEIN | 3 | 140 | - | - | |
| Lja4g3141 | 327 | SUPERFAMILY | Ran binding protein zinc finger-like | 284 | 319 | IPR036443 | - | |
| Lja4g3141 | 327 | ProSitePatterns | Zinc finger RanBP2-type signature. | 9 | 28 | IPR001876 | - | |
| Lja4g3141 | 327 | ProSiteProfiles | Zinc finger RanBP2 type profile. | 5 | 34 | IPR001876 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja4g3141 | - | - | lja:Lj4g3v1037490.1 | 709.138 |
Event-related genes