Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3134 ATGAAAATAGTTACATACAACGTGAACGGCCTGAGACAGCGCATAGCGCAGTTCGGTTCTCTCCGGAATCTTCTAAATTCATTCGACGCCGACATCATTTGCTTTCAGGAGACCAAACTCAGGAGGCAGGACCTCACTGCGGATCTCGTTATGGCCGATGGCTATGAATCTTTCTTCTCCTGCACCCGCACCTCCGACAAGGGCCGCACCGGTTATTCCGGTGTTATTACATTTTGTCGTGTGAAGTCTGCATTTTCGAGTAATGAAGTGGCCTTGCCCCTTGCGGCTGAGGAAGGTTTCACTGGTCTTATGGGCGACTCTCAAACTTGCAAAGCCAATTTGCCATTCTCCATGGACGATCTTGAGGAATTTTCAAAAGATGAGCTTCTCAGTGTTGATAGTGAGGGGCGTTGCATTATCACAGATCACAGTCACTTTGTTCTTTTCAATATATACGGGCCTCGGGCTGGAGGTGATGACAAAGAAAGGATTCAGTTCAAGCAAAATTTTTACAAGATCTTGCAGAAAAGATGGGAGACTCTCCTGCATCAGGGAAGAAGAATATTTGTTGTTGGGGATCTCAACATTGCACCATTTGCAATTGATCGATGTGATGCAGGACCTGATTTTGAAAATAATGAGTTTAGAAGATGGTTCAAATCAATGTTGATTGAAAATGAAGGCCGATTTTCTGATGTCTTCAGAGCAAAGCATCCTAATAAAACGGAAGCATACACCTGTTGGGCACAAAATACAGGTGCTGAGGTATTTAACTTTGGGAGTAGAATTGACCATATTCTATGCGCGGGTTCTTGCTTGCATGAATCTGATGACCTGAAATGTCATAGTTTTATAAGATGCCATGTAATGGACTGTGACATTTTGACAGAGTACAAACGTTGTAAACCTGAAAGCACACTGAGTGCCCACAGGTGGAAGGGGGGGCGAAGCATTAAACTGGAAGGATCTGATCATGCTCCAGTTTATATGACTTTACTTGAAATTCCTGAGGTCTCTCTGCATAGTACTCCCTTCTTATCTGCTAGATATGTTCCCATGGTTCATGGCATACAGCAAACTCTAGTGTCAATGTTGGTGAAAAGACGAGTTTCTGAACAAACAAAATCATGCGAGATGGTAAATGAAGACATTTCAATGGGTAGTACTTATGAGAGTATAGAACCAACTAACCAAACTGATTCATCTACTAGTGAGTGTCATTTTCCTTCAAGCCAGGATTCTGTGTGTAGCATTTTGGAATCAAAGGAACTTTCCAGAGGTTCTTCTCAGGAGGCGGCTATTTCTAAATCAGGAAGTGGATATGAAAAATCAATGCCCAGGAAATGTAATGAATCCAAGAAAAAAGCAAGAAACAATCAAGGGTCCCAGCTCTCCCTTCGGTCATTTTTCCAGAAAAGTACAAATCTTGATAATGGTGTCAATAACTCTTGCACTGATCACTCAAATAATCAGGCTGAACCCTCACAACCCGATCCTCATTTACGTGAAACTTCTACAGCGATTGATCATAGTAGCAGTCCCAAGCAATGTGAGGTTAATACTGATGCATGTGACCTGGATTTAGCTGAACTAAATGATAGTTCTAGGAAGGAAGAAAAGAGTAATGTAGCTTCACTGGAGTGGCAAAGAATACAACAAATGATGCAGAATAGTATACCTCTTTGCAAGGGCCATAAGGAACGTTGCATTGCTCGAGTAGTGAAGAAACAAGGATCTAATTTTGGCCGCAGATTCTATGTTTGTGCCCGTGCTGAGGGCCCTGCATCTAATCCTGAAGCAAACTGTGGTTACTTCAAATGGGCTACTTCAAAGTCTAGGAATAAATAA 1848 0.4226 MKIVTYNVNGLRQRIAQFGSLRNLLNSFDADIICFQETKLRRQDLTADLVMADGYESFFSCTRTSDKGRTGYSGVITFCRVKSAFSSNEVALPLAAEEGFTGLMGDSQTCKANLPFSMDDLEEFSKDELLSVDSEGRCIITDHSHFVLFNIYGPRAGGDDKERIQFKQNFYKILQKRWETLLHQGRRIFVVGDLNIAPFAIDRCDAGPDFENNEFRRWFKSMLIENEGRFSDVFRAKHPNKTEAYTCWAQNTGAEVFNFGSRIDHILCAGSCLHESDDLKCHSFIRCHVMDCDILTEYKRCKPESTLSAHRWKGGRSIKLEGSDHAPVYMTLLEIPEVSLHSTPFLSARYVPMVHGIQQTLVSMLVKRRVSEQTKSCEMVNEDISMGSTYESIEPTNQTDSSTSECHFPSSQDSVCSILESKELSRGSSQEAAISKSGSGYEKSMPRKCNESKKKARNNQGSQLSLRSFFQKSTNLDNGVNNSCTDHSNNQAEPSQPDPHLRETSTAIDHSSSPKQCEVNTDACDLDLAELNDSSRKEEKSNVASLEWQRIQQMMQNSIPLCKGHKERCIARVVKKQGSNFGRRFYVCARAEGPASNPEANCGYFKWATSKSRNK* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3134 615 MobiDBLite consensus disorder prediction 477 518 - -
Lja4g3134 615 Gene3D Endonuclease/exonuclease/phosphatase 1 333 IPR036691 -
Lja4g3134 615 TIGRFAM xth: exodeoxyribonuclease III (xth) 1 279 IPR004808 GO:0004518|GO:0006281
Lja4g3134 615 PANTHER AP ENDONUCLEASE 1 605 IPR004808 GO:0004518|GO:0006281
Lja4g3134 615 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 2 1 605 - -
Lja4g3134 615 SUPERFAMILY DNase I-like 1 332 IPR036691 -
Lja4g3134 615 Pfam Endonuclease/Exonuclease/phosphatase family 4 270 IPR005135 GO:0003824
Lja4g3134 615 Pfam GRF zinc finger 560 609 IPR010666 GO:0008270
Lja4g3134 615 ProSiteProfiles AP endonucleases family 1 profile. 1 334 IPR004808 GO:0004518|GO:0006281
Lja4g3134 615 MobiDBLite consensus disorder prediction 387 409 - -
Lja4g3134 615 MobiDBLite consensus disorder prediction 427 465 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3134 K10772 - gmx:100781120 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3134 4 59346351 59355032 Lja4g3134 4 59346351 59355032 ECH