LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja4g3130	ATGGCTGCCGCAGTAACTGCTGCAGTTTCCTTTCCATCCACCAAATCCACCTCTCTCACAAGCAGAACCTCCATCGTTGCCCCAGAGAGAGTTGTGTTCAAGAAGGTTCCATTGCAATACACTAGTGGAAGGGTTGTTTCCATCAGGGCTCAAGTCACCACTGACACTGATACACAGGCTCCACCAGCTAAGGTTGAGAAGGTGCACAAGAAACAGGAGGAAGGTGTGGTTGTGAACAAGTTCAAACCAAAGAATCCATATATTGGAAGAGTCCTTCTCAACTCAAAGATCACTGGAGATGATGCTCCTGGAGAAACATGGCATATGGTCTTCAGCACTGAAGGGGAGGTTCCTTACAGAGAGGGACAATCAATTGGGGTGATTCCAGAAGGTATTGACAAGAATGGCAAACCACACAAACTGAGATTGTATTCCATTGCCAGCAGTGCCCTTGGTGACTTTGGAGACTCTAAGACTGTTTCTCTTTGCGTGAAACGGCTAGTGTACACAAACGATAGCGGAGAAATTGTCAAGGGAGTCTGCTCAAACTTCTTGTGTGACTTGAAGCCAGGATCTGAAGTAACAATCACTGGACCTGTTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCGTCATCATGTTGGCAACTGGAACTGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATGTTCTTCGAGAAGCATGATGACTACAAGTTCAATGGTTTGGCATGGCTCTTCTTGGGTGTCCCAACAAGCAGCTCTCTGCTTTATAAGGAGGAATTTGAAAAGATGAAGGAGAAATCACCTGAAAACTTCAGGTTGGACTTTGCTGTGAGCAGAGAGCAAACAAATGATAAAGGAGAGAAGATGTACATCCAAACCCGTATGGCTCAATATGCAGAAGAGCTGTGGCAACTACTTAAGAAAGACAACACTTTTGTGTACATGTGTGGACTGAAAGGGATGGAAAAGGGAATTGATGACATTATGGTGTCATTGGCTGCCAGAGATGGCATTGATTGGATTGAGTACAAGAGGCAATTGAAGAAAGCAGAGCAATGGAATGTTGAAGTCTATTAA	1092	0.4451	MAAAVTAAVSFPSTKSTSLTSRTSIVAPERVVFKKVPLQYTSGRVVSIRAQVTTDTDTQAPPAKVEKVHKKQEEGVVVNKFKPKNPYIGRVLLNSKITGDDAPGETWHMVFSTEGEVPYREGQSIGVIPEGIDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDSGEIVKGVCSNFLCDLKPGSEVTITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKSPENFRLDFAVSREQTNDKGEKMYIQTRMAQYAEELWQLLKKDNTFVYMCGLKGMEKGIDDIMVSLAARDGIDWIEYKRQLKKAEQWNVEVY*	364

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja4g3130	363	CDD	CYPOR_like_FNR	79	363	-	-
	Lja4g3130	363	PANTHER	-	1	363	IPR015701	GO:0016491
	Lja4g3130	363	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	84	206	IPR017927	GO:0016491
	Lja4g3130	363	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	209	363	IPR039261	-
	Lja4g3130	363	PIRSF	Frd-NADP+_RD	1	363	IPR015701	GO:0016491
	Lja4g3130	363	Pfam	Oxidoreductase NAD-binding domain	216	330	IPR001433	GO:0016491
	Lja4g3130	363	SUPERFAMILY	Riboflavin synthase domain-like	67	205	IPR017938	-
	Lja4g3130	363	PIRSF	FNR-PetH	2	363	IPR035442	GO:0016491
	Lja4g3130	363	Gene3D	-	201	363	IPR039261	-
	Lja4g3130	363	PANTHER	FERREDOXIN--NADP REDUCTASE, LEAF ISOZYME 1, CHLOROPLASTIC	1	363	-	-
	Lja4g3130	363	Gene3D	Translation factors	37	200	-	-
	Lja4g3130	363	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	245	254	IPR001709	GO:0016491
	Lja4g3130	363	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	293	309	IPR001709	GO:0016491
	Lja4g3130	363	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	142	149	IPR001709	GO:0016491
	Lja4g3130	363	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	119	129	IPR001709	GO:0016491
	Lja4g3130	363	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	179	188	IPR001709	GO:0016491
	Lja4g3130	363	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	257	268	IPR001709	GO:0016491
	Lja4g3130	363	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	215	234	IPR001709	GO:0016491
	Lja4g3130	363	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	317	325	IPR001709	GO:0016491

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja4g3130	Lja-Chr4	59294595	59297728	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja4g3130	K02641		-	gmx:100802032	666.381

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja4g3130	4	59294595	59297728	Lja4g3130	4	59294595	59297728	ECH