Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3124 ATGGATGATGACCACGAAATCAACGCTCCTCTAATTACAACCCACCGCAGCACCACCAACCACGCTACCACTTCCGGCGACATTTCCCCCTCACCGGCCGGCGAAAATTCCCCAATCGAGCAGGTGGCGCTGACAGTCCCAGTAACCGACGATCCTTCTCTCCCTACCTTCACCTTCAGAACATGGATCCTCGGAACACTCGCGTGCGTCGTCCTCTCGTTCCTCAACCAATTCTTCGGATTCCGCCGCGAGCCGCTCTCCGTCACGGCGATCTCGGCGCAGATCGCCGTGCTACCGCTGGGACACCTCATGGCGTCGACGGTGACGGATCGAGTGTTTTTCAGGGGGAAGAGGTGGGAGTTCACGCTGAATCCGGGGAGGTTCAACGTGAAGGAGCACGTGCTCATCACCATCTTCGCGAGCTCCGGTGCGGCTAGCGTCTACGCGATTCATTTCGTGACGGCTGTTAAGGTGTTTTACCGGAAGGATATGACGGCTGTGGTGGCGTTGCTGGTGGTTGTGACGACGCAGGTTTTGGGGTTCGGTTGGGCGGGGGTTTTCCGGCGGTATTTGGTGGAGCCCGCTGCTATGTGGTGGCCCCAGAACCTCGTTCAGGTCTCGCTTTTCAGGGCGCTGCACGAGAAAGAGGAAAGGCCAAAAGGCGGGTTAACTCGGAACCAGTTCTTCCTCATAGCTTTCATTTGCAGCTTTGCTTATTATGTCTTTCCAGGCTACTTGTTCCCAATGTTATCCTCACTTTCCTGGGTCTGCTGGATTTTCCCCACTTCTGTACTAGCACACCAGTTAGGTTCAGGGTTGCATGGTCTTGGAGTTGGTGCTGTTGGTCTTGACTGGTCCACCATATGTGCTTATCTTGGCAGCCCTCTGGCCAGTCCATGGTTTGCCACGGCTAACGTTGCTGCTGGTTTTGGCATTTTCATGTATGTCATCATGCCCATTGCTTATTGGCTCAACCTTTACAACGCAAGAAGATTTCCCATATTTTCAGATGGTCTATTCATGTCCGATGGTGAAAAATACAATATCTCAAGTATCATGGATTCCAAGTTTCACCTAGACATGGAGGCTTATCACCGTCAAGGCCCTCTTTATCTTAGCACCATGTTTGCTATGGTATATGGCATTGGTTTTGCTTGCCTCTCTGCAACCCTAGTTCATGTGTTTCTCTTCCATGGGAGTGAAATAATGCAGTTGAGTAAGTCTGCTTTCCAAGACAAGAAGATAGATATACACACGAAGATCATGAGGAAGTATTACAAACATGTTCCTGAATGGTGGTTTGTTTGTATTCTTTTGTTCACTATCATGGCAACTGTATTTATTTGTGAGTATTATACTGATCAACTCCAGCTGCCATGGTGGGGTGTGATTTTAGCCTGTGTTGTTGCCATATTGTTTACTCTTCCAGTTGGAATACTCAGAGCCACGACAAATCAGGCACCGAGTTTGAATATCATCACAGAGTTCATAATTGGATACATTCGCCCAGGATATCCAGTTGGTGTCATGTTGTTTAAAGTGTATGGGAACGTGAGTATGAAACAAGCGGTTTTCTTTTTGCAAGATTTTAAGCTTGGCCATTACATGAAGATTCCTCCTAGAGCAATGTTCATGGCACAGGTACTTGGCACCTTAGTATCAGCATTGGTACATTTAGTAACAATGTGGTGGCTCATGAACACTGTACCAAATTTTTGTGATAAAGAATTGCTTCCACAAGGTAGCCCATGGACTTGCCCAGGTGATCATGTCTTCTATGATTCGTCTGTGATATGGGGTTTGATAGGGCCTCGAAGAATTTTTGGTGATCTTGGACACTACTCTGCCATCAATTGGTTTTTCTTGGCTGGTGCTATTGCCCCTTTCCTTGTTTGGCTTGCACACAAGGCATTCCCTGAAAAGGAATGGATTAGACTCATCACTGTTCCTGTGCTCTTGGGAGCATTATCTGAATTGCCACCTGCTACAGCAGTGAACTACTCCAGTTGGATTCTTGTTGGATTTGCATCAGGATTTGTTGCCTACCGTTACCACCGCGGCTGGTGGAGCCGCCACAATTATGTCTTGTCAGGTGCACTTGATGCTGGATTAGCCTTCATGGGTGTTTTGCTCTACTTGTGTTTAGGGATGCAGCATATCAGTTTAGATTGGTGGGGCAGTGACTCGGATGGGTGTTCCTTAGCTTCATGTCCAACTGCTCCAGGTGTTAAATCTGAAGGGTGTCCTCTTTACTAA 2256 0.4809 MDDDHEINAPLITTHRSTTNHATTSGDISPSPAGENSPIEQVALTVPVTDDPSLPTFTFRTWILGTLACVVLSFLNQFFGFRREPLSVTAISAQIAVLPLGHLMASTVTDRVFFRGKRWEFTLNPGRFNVKEHVLITIFASSGAASVYAIHFVTAVKVFYRKDMTAVVALLVVVTTQVLGFGWAGVFRRYLVEPAAMWWPQNLVQVSLFRALHEKEERPKGGLTRNQFFLIAFICSFAYYVFPGYLFPMLSSLSWVCWIFPTSVLAHQLGSGLHGLGVGAVGLDWSTICAYLGSPLASPWFATANVAAGFGIFMYVIMPIAYWLNLYNARRFPIFSDGLFMSDGEKYNISSIMDSKFHLDMEAYHRQGPLYLSTMFAMVYGIGFACLSATLVHVFLFHGSEIMQLSKSAFQDKKIDIHTKIMRKYYKHVPEWWFVCILLFTIMATVFICEYYTDQLQLPWWGVILACVVAILFTLPVGILRATTNQAPSLNIITEFIIGYIRPGYPVGVMLFKVYGNVSMKQAVFFLQDFKLGHYMKIPPRAMFMAQVLGTLVSALVHLVTMWWLMNTVPNFCDKELLPQGSPWTCPGDHVFYDSSVIWGLIGPRRIFGDLGHYSAINWFFLAGAIAPFLVWLAHKAFPEKEWIRLITVPVLLGALSELPPATAVNYSSWILVGFASGFVAYRYHRGWWSRHNYVLSGALDAGLAFMGVLLYLCLGMQHISLDWWGSDSDGCSLASCPTAPGVKSEGCPLY* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3124 751 PANTHER OLIGOPEPTIDE TRANSPORTER 7-LIKE 19 750 - -
Lja4g3124 751 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 35 720 IPR004648 GO:0055085
Lja4g3124 751 MobiDBLite consensus disorder prediction 1 36 - -
Lja4g3124 751 MobiDBLite consensus disorder prediction 11 36 - -
Lja4g3124 751 Pfam OPT oligopeptide transporter protein 57 714 IPR004813 GO:0035673
Lja4g3124 751 PANTHER ISP4 LIKE PROTEIN 19 750 IPR004648 GO:0055085
Lja4g3124 751 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 42 716 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3124 Lja-Chr4 59191631 59197958 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3124 39 751 Organic Solute Cotransporters AT4G27730 61.173 0.0 945
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3124 - - lja:Lj4g3v1061090.1 1383.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3124 4 59191631 59197958 Lja4g3124 4 59191631 59197958 ECH