Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3110 ATGGCAAAACGAAACTGCATCGTTGTTCTCTCATCGGACGATGAAGATGATGCTTCCAACTCCAACACTCCTTCACTGCGTTCCACCCGCAGCTGCACAAAGCCCAAACCGAGGTCAACAACCTCCCGAGGTCACAAGAGGGCCCGAGTTTCCCGTTCTGGACCTCACATCTCTAAGGTTCACGAGATCAACTTATTTGATGATGACTTCAGTCAAGTGTTTACTGGGTCAAAGGTATCTGCTGGTACTCAAAGGAGCAACGCAGAGGAGCTGTGGGTTAATAAATACGAGCCCCATTCACTGGAAGAGCTGGCTGTCCACAAGAAAAAGGTGGAAGAAGTTAAGACATGGTTCGAGGAAAGGTTGAAACCTTCAAAGGGTCTCAACAGAAATAATGTTCTTGTCGTCAGTGGGCAGGCAGGAGTTGGAAAATCTGCTACTATACATGTAATCGCAGCTCATCTGGGAGCAGTAGTATGTGGATGGAACACGCCTACACCTGTAATTTGGCAAGAACATCTGTATAACACTGGCACAGGGACACGGTACACATCCAAGTTGGATGAGTTTGAAACTTTTGTTGATAGAGTACGAAAATATGGATTAATGCCAACTTCCTTTGATGTGGAGTCAAAGCCTTCCACCATACTTTTAATAGATGATCTTCCCATGACAAATGGGAAAACTGCCTTTGAAAGACTTAAATATTGCTTGCACCTTTTGGTGCACTCAACTCAAATACCCACAGCAATTTTGGTCACAGATTATGGCAATGTTGATTCAGCAGACTGTAATGCACGGTGCATGGAAGAACTTAAGCTATCTCTAGAGAGTTCCGGGGCTTGTAAGGTTGCGTTCAATCCAATTACAACGAATTCGATTAAGAAGATACTCTTTAGAATATGTCAAATGGAGCACTGCGATGTGAGTGCTGATGATGTTGATCTAATAGCAAAAGCAAGTGGAGGTGACATCAGACATGCAATTACTTCCTTACAGTTTTTCTGTCTGAAACCGAATCAAGTACATTCTTTGTCTCTATCTACTCGCGCTCCCCGTGCCTCAAAAGAGTCTAGAAATAAACCTGTGGAATTAGATGATATGTATCCCTTGCACTTTGGCAGGGATGAGACACTTTCTTTATTTCATGCCTTGGGGAAATTTTTGCACAATAAAAGGGAGACTGGAGTTGCAATAGACTTTGACCAAGATGACTTTCTTATACGAGAGAATTTTTCAAGATTACCATTGAAAATGGATGTCCCAGAGAAGATTCTCTGTCAAGCCCATGCGCAACCTGGTCCAGTTGCTGAGTTTCTGCATGAAAATGTTCTGGATTTTTTGAATGATGAAGCCATAGATGATGCGTGGGTTTTGTCTTCATATCTAGGGGATGCTGACATTCTTCTTGCCAAACTTCGGGGAACGTTATCTAGTAATAGTGAGGCAGAGAGTGTTTTACAATCAGCTGCTGCATCCATAGCTGTTCGTGGGGTACTATTTGGAAATTCTCATCCACTTTCCTCCAGGTGGCATGCAATTCGTCGACCGAAGCTCTGGCATGTCGAGAAAGCATCAAGATACAACAAAAATGAAATGCTTAGGCAGAGAATCCCTGCTTATCAACGGCTTAGTTCTTATCATATGTCAATTATGGCCACAGAGTTTATGCCTATGTATAAATTGCTTGGAAATAGGGCATGTGGTGAATATGACGAACTACATCAGGAATCAGTAGAGAACTTGGATATGGAAGATTTTGAACTTGACAAAATGAGCCTAGATGACCCAGCTATGGCGATATCCGAAGATGACATAGAAGATTGGTAG 1830 0.4279 MAKRNCIVVLSSDDEDDASNSNTPSLRSTRSCTKPKPRSTTSRGHKRARVSRSGPHISKVHEINLFDDDFSQVFTGSKVSAGTQRSNAEELWVNKYEPHSLEELAVHKKKVEEVKTWFEERLKPSKGLNRNNVLVVSGQAGVGKSATIHVIAAHLGAVVCGWNTPTPVIWQEHLYNTGTGTRYTSKLDEFETFVDRVRKYGLMPTSFDVESKPSTILLIDDLPMTNGKTAFERLKYCLHLLVHSTQIPTAILVTDYGNVDSADCNARCMEELKLSLESSGACKVAFNPITTNSIKKILFRICQMEHCDVSADDVDLIAKASGGDIRHAITSLQFFCLKPNQVHSLSLSTRAPRASKESRNKPVELDDMYPLHFGRDETLSLFHALGKFLHNKRETGVAIDFDQDDFLIRENFSRLPLKMDVPEKILCQAHAQPGPVAEFLHENVLDFLNDEAIDDAWVLSSYLGDADILLAKLRGTLSSNSEAESVLQSAAASIAVRGVLFGNSHPLSSRWHAIRRPKLWHVEKASRYNKNEMLRQRIPAYQRLSSYHMSIMATEFMPMYKLLGNRACGEYDELHQESVENLDMEDFELDKMSLDDPAMAISEDDIEDW* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3110 609 Gene3D - 290 359 - -
Lja4g3110 609 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 36 608 - -
Lja4g3110 609 Pfam Rad17 P-loop domain 87 263 - -
Lja4g3110 609 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 337 IPR027417 -
Lja4g3110 609 Gene3D - 89 270 IPR027417 -
Lja4g3110 609 MobiDBLite consensus disorder prediction 39 54 - -
Lja4g3110 609 MobiDBLite consensus disorder prediction 1 54 - -
Lja4g3110 609 MobiDBLite consensus disorder prediction 14 38 - -
Lja4g3110 609 CDD HLD_clamp_RFC 289 334 - -
Lja4g3110 609 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 36 608 IPR004582 GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3110 K06662 - gmx:100799826 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3110 4 58847251 58852436 Lja4g3110 4 58847251 58852436 ECH