Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3028 ATGGGGTTTCTAGAACTCTTGTCTGTTGCCTCTTACCCGGTGATGAAAGTGTTACTCATTACCGCGATTGGTGTGTTTCTTGCATTGGATAACATAGATGTTCTGGGAGCAGATGCAAGGAAGAAAGTGAACAATCTTGTGTTTTATGTGTTTAATCCATCCCTGGTGGGTAGCAATTTGGCCAAAACCTTAACCTCTGAGAATGTTCTTTCATTGTGGTTCATGCCTGTCAATGTTATTGTCACATTCATATTAGGCTCAGCCTTAGCATGGATTTTGATTAAAATCACAAGGCCTCCCAAGCACTTGGAAGGTTTAATTTTGGGTTGCTGTTCTGCAGGAAATTTAGGGAACTTGCCTATAATCATCATTCCAGCTATATGTAAAGACAAAGACAGTCCTTTTGGAGAACCTGATATCTGCTATCAATATGGGATGGCTTACGTCTCACTTTCCATGGCGGTTGGTGCGGTTCTAATATGGACATATGTTTACTACATAATGAGGGTTTCCTCAAAGACACTTCACAAAGAAAGTGGTACAATATCACAATCACAGCCAGACAATATTTCAGAAACACCTACTCCTGCAAAAGACACACTGGATGATGCATATACTCAACTGCTTCCTACCACAGAATCACAGGAAAAAGTGAAGGTTTCAATCTCATACAAAATTAAGAGCCAGCTGTGGAAGATTTCAAGCAATATCAATTTTGGACACGTTTTCGCGCCATCAACCATCGGAGCGATTACTGGCTTTAGCATTGGTGTAATCCCCCCAATACGTAATTTCCTGGTTGGCAACAATGCTCCACTTCGTGTGGTTGAAGACTCTGCATCCATGTTAGGTGATGCAGCCATTCCAACAGTCACACTTATATTGGGTGCAAATCTCCTTGGAGGTTTGAAGGGAACAAGTACTCCACTTTGGACCATTGTTGGAATTATATTAGTCAGATATATTTTCCTGCCACTATTGGGTGTTGTAATTGTAAAAGGGGCAGTAAAATTTGGCTTGGTGCCATCAGATCCCTTATATCAGTTTGTGCTTCTACTTCAATATGCATTGCCTCCAGCTATGAATATAGGAACTATGGCTCAATTGTTTGGAACTGGCCAAAGTGAATTCTCGGTTATCATGCTATGGTCATATGCTCTGGCGTCAATTGCAGTAACCCTTTGGTCCACCTATTTCATGTGGCTAGTTGCTTGA 1215 0.4132 MGFLELLSVASYPVMKVLLITAIGVFLALDNIDVLGADARKKVNNLVFYVFNPSLVGSNLAKTLTSENVLSLWFMPVNVIVTFILGSALAWILIKITRPPKHLEGLILGCCSAGNLGNLPIIIIPAICKDKDSPFGEPDICYQYGMAYVSLSMAVGAVLIWTYVYYIMRVSSKTLHKESGTISQSQPDNISETPTPAKDTLDDAYTQLLPTTESQEKVKVSISYKIKSQLWKISSNINFGHVFAPSTIGAITGFSIGVIPPIRNFLVGNNAPLRVVEDSASMLGDAAIPTVTLILGANLLGGLKGTSTPLWTIVGIILVRYIFLPLLGVVIVKGAVKFGLVPSDPLYQFVLLLQYALPPAMNIGTMAQLFGTGQSEFSVIMLWSYALASIAVTLWSTYFMWLVA* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3028 404 MobiDBLite consensus disorder prediction 179 199 - -
Lja4g3028 404 PANTHER - 1 403 IPR045033 GO:0080162
Lja4g3028 404 MobiDBLite consensus disorder prediction 179 196 - -
Lja4g3028 404 Pfam Membrane transport protein 11 395 IPR004776 GO:0016021|GO:0055085
Lja4g3028 404 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3028 Lja-Chr4 56735262 56739816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3028 K24139 - gmx:100817605 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3028 4 56735262 56739816 Lja4g3028 4 56735262 56739816 ECH
Lja4g3028 4 56735262 56739816 Lja4g3028 4 56735262 56739816 PCT