Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3027 ATGGAGCGCGGGAAGATCGCGGCGGAGACGGCGGAGGATCACCGGCGGAATTCCGGCGAACCGGAGGAGAAGGTGTTCGTCGGAAACAAAGAATTCGCCGACTCGTCGTCGTCGACATCGTCATTTCTGGCGCTGGCGTTGTGGCTGGGAGCTATTCATCTCGTCGGCGTTTTGATCTTGTTCTCCCTCCTCTTCCTTCCTCTCTCCAAAGCACTATTGGTTTTTGGTTTGCTTTTCGTGCTAATGGTGATTCCTGTTGATGAAAAGAGCACCTTTGGTAGAAAATTGTCCAGGTACATATGTAAGCATGCTTGTAGCTACTTTCCGATCACGCTTCATGTAGAGGATATAAAGGCCTTCAATCCTGATCGTGCTTATGTTTTTGGTTATGAACCACATTCGGTTTTGCCAATTGGAGTTGTTGCACTAGCAAACAACACAGGTTTTATGCCTCTTCCAAAAATAAAAGTTCTTGCTAGCAGTGCAGTCTTTTACACGCCATTTCTGAGACACATATGGACATGGTTGGGTCTAACACCAGCAACAAGGAAAAACTTTAGCTCCTGGTTGGATGCAGGCTACAGTTGCATCTTAATACCTGGTGGAGTGCAAGAAACATTTTTCATGGAGCGTGGTTCTGAGATTGCCTTTCTCAAGGCTAGAAGAGGATTTATCCGCATGGCAATGGTGAAGGGGCAACCCTTGGTTCCAGTTTTCTGCTTTGGACAGTCAGATGTCTATAAGTGGTGGAAACCCGGTGGGAAGTTAATTCTGAAGTTTGCAAGGGCTATCAAGTTCACCCCAATATACTTCTGGGGAATGTTTGGATCTCCAATACCATTTAAACATCCTATGCATGTGGTGGTGGGTAGGCCAATTGAGCTCAACAAAAATCCAGAACCAACGACTGAGGAGGTTGCCAAAGTCCAAATTCAGTTTATGGAAGCACTTCAAGTTCTTTTTGAAAGGCACAAAGCTCAAGCTGGATATCCGAACCTTGAGCTCAGAATTGTTTGA 1017 0.4592 MERGKIAAETAEDHRRNSGEPEEKVFVGNKEFADSSSSTSSFLALALWLGAIHLVGVLILFSLLFLPLSKALLVFGLLFVLMVIPVDEKSTFGRKLSRYICKHACSYFPITLHVEDIKAFNPDRAYVFGYEPHSVLPIGVVALANNTGFMPLPKIKVLASSAVFYTPFLRHIWTWLGLTPATRKNFSSWLDAGYSCILIPGGVQETFFMERGSEIAFLKARRGFIRMAMVKGQPLVPVFCFGQSDVYKWWKPGGKLILKFARAIKFTPIYFWGMFGSPIPFKHPMHVVVGRPIELNKNPEPTTEEVAKVQIQFMEALQVLFERHKAQAGYPNLELRIV* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3027 338 Pfam Diacylglycerol acyltransferase 63 331 IPR007130 GO:0008374
Lja4g3027 338 CDD LPLAT_MGAT-like 122 326 - -
Lja4g3027 338 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 7 338 - -
Lja4g3027 338 MobiDBLite consensus disorder prediction 1 22 - -
Lja4g3027 338 PANTHER TYPE 2 ACYL-COA DIACYLGLYCEROL ACYLTRANSFERASE 7 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3027 Lja-Chr4 56723648 56727791 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3027 28 338 Acyl Lipid Metabolism Gene Families AT3G51520 64.856 1.16e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3027 K22848 - gmx:100809628 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3027 4 56723648 56727791 Lja4g3027 4 56723648 56727791 ECH
Lja4g3027 4 56723648 56727791 Lja4g3027 4 56723648 56727791 PCT