Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3011 ATGGGTTCCCAAGGCGGGTTCGGTCAATCCAAGGAGTTTCTCGACCTCGTCAAGTCCATCGGCGAAGCCCGATCCAAGGCGGAGGAGGACCGCATCGTCCTCCGCGAAGTCGAAACCCTCAAACGCCGCATCGCCGAGCCGGACATCCCTAAACGGAAGATGAAGGAGTACATCATTCGCCTCCTCTACGTCGAGATGCTCGGCCACGACGCCTCCTTCGGTTACATCCACGCCGTGAAAATGACTCACGACGACAATCTCCTCTCCAAACGCACCGGCTACCTCGCCGTCACGCTCTTCCTCAGCGACGATCACGACCTCATCATCCTCATCGTTAACACCATACAGAAGGATCTCAAGTCTGATAACTACCTCGTTGTTTGCGCCGCGTTGAACGCCGTCTGCCGCCTCATCAACGACGAGACGATTCCCGCCGTTTTGCCCGTCGTCGTCGAACTTCTCTCGCATTCCAAGGAGGCAGTTAGAAGAAAAGCAGTCATGGCGCTCCACCGGTTTCATCACAAATCACCTTCCTCCGTTTCGCACCTCATTTCGAATTTCCGGAAGCGATTGTGCGATAACGACCCTGGTGTGATGGGTGCTACTTTGTGCCCTATCTTTGACCTTGTGAATGAGGATCCTACCCCGTACAAGGACCTTGTTGTTAGCTTTGTTAACATTCTTAAACAGGTCGCGGAACACCGGTTGCCCAAGAGCTATGACTATCACCAAATGCCTGCTCCCTTCATTCAGATTAAGTTGCTGAAAATTCTGGCTTTGTTGGGGAGTGGGGACAAGCATGCAAGTGAACAGATGTATACGGTTGTTGGCGATATAATGAGGAAGAGTGATTCATCGAGTAATATAGGGAATGCTATTCTTTATGAGTGCATATGTTGTGTCTCTTCCATATATCCCAATCCGAAGATGTTAGAATCGGCTGCGGATGTGATTGCCAAGTTTTTGAAGAGCGACAGTCATAATCTCAAGTACATGGGCATTGATGCCCTCGGTCGGCTGATAAAGTTAAGTCCACATATTGCAGAACAGCATCAACTAGCAGTCATTGACTGCTTAGAGGACCCTGATGATACTATGAAGCGGAAAACTTTTGAACTGCTATACAAAATGACAAAGTCCTCCAATGTGGAAGTGATTGTTGACCGTATGATTGATTACATGATTAGCATAAATGATGAACATTATAAAACCTATATAGCATCTCGATGTGTAGAACTTGCTGAGCAGTTTGCACCAAGCAATCATTGGTTTATACAGACAATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTGAATATCAAGGTGGCACATAATTTAATGCGGTTGATTGCTGAAGGATTTGGAGAGGATGATAATGGTGCAGATAGTCAGTTGAGATCGTCTGCTGTTGAGTCGTATTTACGCCTAATTGGAGAGCCGAAGCTTCCCTCTGTGTTTCTTCAAGTCATCTGCTGGGTTTTGGGGGAATATGGCACATCTGATGGTAAACATTCTGCTTCCTACATCACTGGGAAGTTATGTGACGTAGCAGAGGCATATTCTAATGATGAAACGGTTAAGGGATATGCAATTTCAGCGATGACAAAAACTTATGCATTTGAAATAGCAGCTGGGAGGAAGGTGGATATGCTACCTGAGTGTCAATCTTTGGTTGAAGAATTATTGGCATCCAACTCCACTGACTTGCAGCAACGTGCTTATGAATTGCAAGCCCTTATTGGTTTGGATGCACGAGCTGTTGAATCAATAATGCCGCAAGATGCAAGTTGTGAAGATATTGAGGTGGATAAAAATCTTTCTTTCCTCAATGATTATGTCCAGCAGTCTCTAGAAAGGGGTGCGATGCCCTACTTTCGTGAGGATGAGCGGGCTGGAATAGTGAATATAAGCAACCTCAGTAGCCAGGATCAGCATGAATCTGCACAGCATAGTCTGAGATTTGAAGCGTATGAACTTCCCAAGGTTCCAGTACCATCAAAAGTTGCTCCAGTTTCTCTTTCATCCTCAACTGACCTTGTTCCAGTACCTGAGGCATTGTATTCTAGAGAAACTCCCCAGATCTCTTCAGCGAGAGTACCATCAGAGATAGGATCATCAGATCTTAAGCTAAGGCTTGATGGTGTTCAGAAGAAGTGGGGTAAGCCAACCTATTCATCTCCATCACCATCTTCCTCAAGTTCTACTTCCCAAAACCCAGTGAATGTGGTGACTAAGACGGATGTTGCTACTGCTGTAAATTCAAAAGTACGTGATAGCTATGATTCAAGAAAGCAACATATTGAAATTTCACCAGAAAAGCAGAAGCTTGCTGCTTCATTGTTTGGTGGTTCCACTAAACCCGAGAAAAGAACATCAACTAGCAATAAGGTTCCAAAGGCTAGTGCTAGTGCTTCAGACAGATCTCAGGAACCGAAAGCTGCAGTTTTACCCAAGAAAACAGCTGCAGAGAAAACCAATCAACAATCTCCTCTTCCAGATTTGCTTGACTTGGGTGAACCAACTGTTACTGCTACAGCTCCCTCTCTGGACCCATTCATGCAATTGGAAGGACTTCTTGACCCAAGCCTTAGTTCTACAACAAGTAATAGTAGTAGTGCTGCTACAAATACACCTGACCTTATGGAACTCTATTCGGAAACTACTGCTAGTGGACAGAGTGATAGTGGTGGCTATTCTATCCCCCCTGTGAGTGGGGATAATTTAACTCTTTTATCTGAGTTGTCGAACGCCACTGCCCGAGATACCAAAGGAGAAACAATTGCAATGCCTTTGTCACAATCCGTAAAGGGTCCGAACGCTAAAGATTCTTTGCAGAAGGATGCAAAAGTCAGACAGATGGGTGTCAACCCCTCAAGTCAGAATCCCAACTTGTTCAGGGACTTGCTTGGCTAA 2916 0.4554 MGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLREVETLKRRIAEPDIPKRKMKEYIIRLLYVEMLGHDASFGYIHAVKMTHDDNLLSKRTGYLAVTLFLSDDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCRLINDETIPAVLPVVVELLSHSKEAVRRKAVMALHRFHHKSPSSVSHLISNFRKRLCDNDPGVMGATLCPIFDLVNEDPTPYKDLVVSFVNILKQVAEHRLPKSYDYHQMPAPFIQIKLLKILALLGSGDKHASEQMYTVVGDIMRKSDSSSNIGNAILYECICCVSSIYPNPKMLESAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPHIAEQHQLAVIDCLEDPDDTMKRKTFELLYKMTKSSNVEVIVDRMIDYMISINDEHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDNGADSQLRSSAVESYLRLIGEPKLPSVFLQVICWVLGEYGTSDGKHSASYITGKLCDVAEAYSNDETVKGYAISAMTKTYAFEIAAGRKVDMLPECQSLVEELLASNSTDLQQRAYELQALIGLDARAVESIMPQDASCEDIEVDKNLSFLNDYVQQSLERGAMPYFREDERAGIVNISNLSSQDQHESAQHSLRFEAYELPKVPVPSKVAPVSLSSSTDLVPVPEALYSRETPQISSARVPSEIGSSDLKLRLDGVQKKWGKPTYSSPSPSSSSSTSQNPVNVVTKTDVATAVNSKVRDSYDSRKQHIEISPEKQKLAASLFGGSTKPEKRTSTSNKVPKASASASDRSQEPKAAVLPKKTAAEKTNQQSPLPDLLDLGEPTVTATAPSLDPFMQLEGLLDPSLSSTTSNSSSAATNTPDLMELYSETTASGQSDSGGYSIPPVSGDNLTLLSELSNATARDTKGETIAMPLSQSVKGPNAKDSLQKDAKVRQMGVNPSSQNPNLFRDLLG* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3011 971 MobiDBLite consensus disorder prediction 722 742 - -
Lja4g3011 971 SUPERFAMILY ARM repeat 10 584 IPR016024 -
Lja4g3011 971 MobiDBLite consensus disorder prediction 953 971 - -
Lja4g3011 971 MobiDBLite consensus disorder prediction 786 809 - -
Lja4g3011 971 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 4 967 - -
Lja4g3011 971 MobiDBLite consensus disorder prediction 755 847 - -
Lja4g3011 971 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 4 967 - -
Lja4g3011 971 Gene3D - 3 594 IPR011989 -
Lja4g3011 971 MobiDBLite consensus disorder prediction 720 742 - -
Lja4g3011 971 MobiDBLite consensus disorder prediction 931 971 - -
Lja4g3011 971 PIRSF AP4_epsilon 1 699 IPR017109 GO:0015031|GO:0030124
Lja4g3011 971 PIRSF AP4_epsilon 865 971 IPR017109 GO:0015031|GO:0030124
Lja4g3011 971 PIRSF AP4_epsilon 717 832 IPR017109 GO:0015031|GO:0030124
Lja4g3011 971 MobiDBLite consensus disorder prediction 758 772 - -
Lja4g3011 971 Pfam Adaptin N terminal region 44 582 IPR002553 GO:0006886|GO:0016192|GO:0030117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3011 K12400 - gmx:100806914 1581.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3011 4 56026335 56035329 Lja4g3011 4 56026335 56035329 ECH