Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3010 ATGGAGAACAATAGAGAGAGCAATAGCAGAAGTGGTAGCTTCAGGTTGGGTTTGGGTTTGGGAGTGAACGAGGCAAAAGTTCACACCGTGATTGAGCTCGGTAGTGTTGATACACAAGGTCTTCTTCTTAATGGTGGTGGTGATGTTGGTGGTGAGGAGAGAGAGAAACAAGAAAAGGCTCCTACGAACTCTCTCTCTCCTAGGCAGATGAAGTCCCTCGTTTCTCTCTGTGACACCATCTTACCTTCCATCAAAGACAACGTTGCAGGTTCCTCTGATGAATCTGTGGCCAATTTCTACCGCACTTCAGCTTCCATGGCTGGCACACATGAACGTCTTGGGATTCTGATAAGTGAGAAATTGAAACACCCAAGTACATGGTTGTTCTTGTTGACGCTATGGCTACTATCAACATGGTTCGGCACATTCATACTGTGCGGCATGGCGAGCCTCTCAATGAAGTTCCCCTTCTTCCACAGCTACCCTGACCTGTCACCGGAAAAACGCCAAAAAATTTTGAAGTCTTGGTCTCTCAGTTACTTTCGTCTCCTGAGGATGTTTTTCAGGACCATCAAGCTTCTCACGCTCCTAAGCTTCTTTACTCAGCAAGATGAAGGAGATAACCCATCATGGAATGCAATTGGATATTGCGGAACAGATCCAGAGTTCAAAGCACAGTTGAAGAACCATCTTTCACAAAGAACATCAAAAGGAGGAGGACATGAGGAAAAAGAAGAGGATGATTATGATGAAGAAGTTGTAGGACCTCTTTACAAAGGTCTTGTCCATCTGAATTACCCACGAGACATCATTACAGATTCTCTAAGACGATTCGGAATCCCAGTCTCTGTTACTCCTCAAAAGAATAAACCTTCTAGCATCTCATCTCCTTCTCTAGTTTTCAAATGTGATGCAGTGGTTGTTGGTTCTGGCTCAGGAGGTGGTGTGGTAGCTGGAGTTCTAGCAAAAGCTGGATACAAAGTGCTGGTCTTGGAGAAAGGAAGCTATTTCGCGAGGAACAATCTTTCCTTACTGGAAGGACCAAGCATGGATCAAATGTACCTCTCCAATGGTTTGGTTGCATCAGATGATATGGCTGTGTTAATTCTAGCAGGATCCACAGTTGGTGGAGGGTCTGCAATCAACTGGTCAGCCAGTATCAAAACCCCTCAGCATGTATGCAAGGAGTGGTGCGACCGCCACGAGCTAGAGCTATTTGAAAGTAAATTATATAAAGAAGCCATGGATACTGTGTGTGAGAAAATGGGAGTCCAATCTGAGTTTGAAGATGAAGGTTTTAATAATGCAGTCCTAAGAAGAGGGTGTCAAGAAATGGGGTATCCTGTTAGCAACATTCCTCGGAATGCTCCACCAGATCACTATTGCGGTTGGTGTTTCATGGGATGCAAGGATGGAAGGAAGAAGGCTACATCAGAAACATGGCTGGTGGACTTGGTAAAATCAGGTAATGGAGCAATCCTCCCCAATTGTGAGGCTATACAAGTCTTGCATAAGAAAATGAAAGGAAGAGACAAAAAAGTGGCCAGTGGAGTTGCTTTTCAAATTGACTACAAGGGACACAAGGACATTTGTGTGGTGGAGTCCAAGGTCACAATTGTAGCCTGCGGAGCACTCCGCACTCCAGAATTACTCAAAAGAAGCGGCTTGAGGAACGAAAACATAGGGAGAAACTTGCATCTTCATCCAGTGACAATGGCTTGGGGCTACTTCCCGGATACGCCTTCACCCGACTCTTGGCCAGAGGAACATAAGAAAAGCTATGAAGGAGGGATTATGACAGCAATGTCCACAGTTGTTGCAGAGTTTGACAAATCTGGATATGGTGCAGTGATCCAAACACCTGCACTACATCCTGGTATGTTCTCACTTCTCATGCCATGGGTTTCTGGAAAGGACATAAAAGATCGAATGAGCAAATTCTCCAGAACAGCTCATGTTTTTGCACTGGCAAGGGACCAAGGGTCAGGAACTTTGAATTCACCAAGCTGTATAAGCTATCAGATGAAAGATGCAGACGAAGAGAGTTTGCAGAAAGGAATTGAGAAGGTACTGAGAATCCTCGCAGCGGCTGGAGCTGAAGAAATTGGGACACATAACAATAAGGGAAGGAGCTTAAATGTTAAGCAGGTGAGCTATCATGAATTCGAGAAGTTTGTGAAAGAAGAAAGCTCAAGGCCAATAACAGACCTTTCAACACCAATATGCTCAGCACATCAGATGGGGAGTTGTCGGATGGGAACTAATCCAAAGGAATCAGTGGTGAACCAGATGGGGGAGACATGGGAGGTGGAGGGTCTTTATCTGGCAGACACGAGTGTCTTTCCTACAGCTTTGGGTGTGAATCCAATGGTCACTGTTCAGGCTATTGCTTACTGCACCGCACAACATGTTCTGGAAGTTCTTCAAAGGAAAAGAAGGTGA 2442 0.4509 MENNRESNSRSGSFRLGLGLGVNEAKVHTVIELGSVDTQGLLLNGGGDVGGEEREKQEKAPTNSLSPRQMKSLVSLCDTILPSIKDNVAGSSDESVANFYRTSASMAGTHERLGILISEKLKHPSTWLFLLTLWLLSTWFGTFILCGMASLSMKFPFFHSYPDLSPEKRQKILKSWSLSYFRLLRMFFRTIKLLTLLSFFTQQDEGDNPSWNAIGYCGTDPEFKAQLKNHLSQRTSKGGGHEEKEEDDYDEEVVGPLYKGLVHLNYPRDIITDSLRRFGIPVSVTPQKNKPSSISSPSLVFKCDAVVVGSGSGGGVVAGVLAKAGYKVLVLEKGSYFARNNLSLLEGPSMDQMYLSNGLVASDDMAVLILAGSTVGGGSAINWSASIKTPQHVCKEWCDRHELELFESKLYKEAMDTVCEKMGVQSEFEDEGFNNAVLRRGCQEMGYPVSNIPRNAPPDHYCGWCFMGCKDGRKKATSETWLVDLVKSGNGAILPNCEAIQVLHKKMKGRDKKVASGVAFQIDYKGHKDICVVESKVTIVACGALRTPELLKRSGLRNENIGRNLHLHPVTMAWGYFPDTPSPDSWPEEHKKSYEGGIMTAMSTVVAEFDKSGYGAVIQTPALHPGMFSLLMPWVSGKDIKDRMSKFSRTAHVFALARDQGSGTLNSPSCISYQMKDADEESLQKGIEKVLRILAAAGAEEIGTHNNKGRSLNVKQVSYHEFEKFVKEESSRPITDLSTPICSAHQMGSCRMGTNPKESVVNQMGETWEVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQHVLEVLQRKRR* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3010 813 MobiDBLite consensus disorder prediction 44 65 - -
Lja4g3010 813 Gene3D - 293 611 IPR036188 -
Lja4g3010 813 SUPERFAMILY FAD/NAD(P)-binding domain 302 810 IPR036188 -
Lja4g3010 813 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 44 812 - -
Lja4g3010 813 Gene3D - 725 811 IPR036188 -
Lja4g3010 813 Pfam GMC oxidoreductase 671 799 IPR007867 GO:0016614
Lja4g3010 813 Pfam GMC oxidoreductase 304 570 IPR000172 GO:0016614|GO:0050660
Lja4g3010 813 PIRSF Lg_Ch_AO 52 813 IPR012400 GO:0046577
Lja4g3010 813 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 44 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3010 Lja-Chr4 56007738 56017469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3010 51 808 Acyl Lipid Metabolism Gene Families AT4G19380 59.449 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3010 K17756 - gmx:100778208 1291.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3010 4 56007738 56017469 Lja4g3010 4 56007738 56017469 ECH
Lja4g3010 4 56007738 56017469 Lja4g3010 4 56007738 56017469 PCT