Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3005 ATGCTGCTGATTAGAAAAAGACTAACTTGCTGCGCCAGGGAAACCAAAATTAGCATTGATTATGACGAGCCAGATAGGATTATGACATATAATGGCCTTGAGGGTTGCATTCTTGATAATCAATCTTATGAAGATGAAAGCAGAACTAGTAGAGGAGATGGATGTATAACTGATTCATTCAATGACGATGACTCCAGTTGTTCATCCAGTAAAGATGCTTTTGATTCATTCTCTTCGAAATGTTTGCCAATGAAAAGGGATGAACATGGATTGGAAGATTGGGAACTCTCAGAAAGCCCTCAACATTTTTATATGAAAGAGAAGCCTGCATCTACCGTCCAATATTCAGATGTAGAAGCCATGAAAGAAAAGTTTGCAAAGCTGTTGCTAGGTGATGATGTTACAGGAGGAACTAAGGGCTCTAACACAGCTTTAGCACTGTCCAATGCCATCACTAACCTAGCAGTGACGGTTTTCGGTGAGTTGTGGAAATTGGAACCTCTATCTGAAGAAAGGAAGAACAAATGGCGAAGAGAAATGGACTGGTTTCTGTCTCCTACCAACTATATGGTTGAACTAGTTCCTGCTAAGCAAAATGGTGCTAATGGAGGGATCTTTGAGATAATGACTCCAAAAGCCCGGGCAGACATCGGCATGAATCTTCCAGCACTTCACAAGTTGGACTCTATGCTTATTGAGGCTCTTGACTCAATGGTGCATACCGAGTTTTGCTATGCCAAGGGAGCAAGCCAGGCAGAAGGGAGGAACACAAGTGGAAAACAAAGCAAAAGATGGTGGCTTCCATCACCCCAAGTACCAGCAACTGGGCTTTCTGACACTGAAAGAAAGAGGCTACTTCATCAGGGAAGGATAGTACATCAAGTATTCAAGGCTGCCAAAGCTATCAATGACAATGTGTTGCTTGAAATGCCCGTGCCATCAATAATTAAAGATGCACTTCTGAAGTCTGGAAAGGCAACCCTTGGAGAGCAACTGCACAAGGTTTTGATGGCTGAATCTAATTCTGGAGAAGAAATTCTTGAATCTCTCAATTTGAAATCTGAACATAGTGCCCTAGAGACCATTAATAGATTGGAAGCTGCTACATTTTCATGGAAAGAGAGAGTAAAGCAAGAACAAAATGGCAGATCCCCACTACGAACCTCGTGGTCTTTCAAGAAAGACCCTGTGTCAGGTATGGATAAGATGGAAACATTGTTGGACCGTGCAGAAACACTTATAAAGCAGCTTAAAACCGAATACCCAAATCTTCCTCAAACATTTCTGGATGCTGCAAAAGTTCAATATGGCAAGGATATTGGGTATTCCATTTTGGAAGCATATTCCAGAGTTCTTGGAAATTTAGCCTTCAGCATCCTATCAAGAATAGGAGATATATTGCAGGAGGATGCTTTAAGCAATCCCAATTCCCCTATGAGTATGACTACAAGTTGCTCTCCAGTGATAAATCTTTTTGAGGTTACTAGGGTGGTTGGTTCACATATCAGGCACTCATTAATTGATAAGATGAACAAGACAGATGTGAAGAATTGTGATTCTGATTCAGAACCCTCATCTGTTGAGGCAAAACCTGACTCAGTAACCGCCACACCAAGCCGTGGTTGA 1626 0.417 MLLIRKRLTCCARETKISIDYDEPDRIMTYNGLEGCILDNQSYEDESRTSRGDGCITDSFNDDDSSCSSSKDAFDSFSSKCLPMKRDEHGLEDWELSESPQHFYMKEKPASTVQYSDVEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVTVFGELWKLEPLSEERKNKWRREMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIGMNLPALHKLDSMLIEALDSMVHTEFCYAKGASQAEGRNTSGKQSKRWWLPSPQVPATGLSDTERKRLLHQGRIVHQVFKAAKAINDNVLLEMPVPSIIKDALLKSGKATLGEQLHKVLMAESNSGEEILESLNLKSEHSALETINRLEAATFSWKERVKQEQNGRSPLRTSWSFKKDPVSGMDKMETLLDRAETLIKQLKTEYPNLPQTFLDAAKVQYGKDIGYSILEAYSRVLGNLAFSILSRIGDILQEDALSNPNSPMSMTTSCSPVINLFEVTRVVGSHIRHSLIDKMNKTDVKNCDSDSEPSSVEAKPDSVTATPSRG* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3005 541 MobiDBLite consensus disorder prediction 514 541 - -
Lja4g3005 541 MobiDBLite consensus disorder prediction 527 541 - -
Lja4g3005 541 ProSiteProfiles PRONE domain profile. 108 480 IPR005512 GO:0005085
Lja4g3005 541 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 20 540 - -
Lja4g3005 541 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 20 540 IPR038937 GO:0005085
Lja4g3005 541 Gene3D PRONE domain, subdomain 1 110 347 - -
Lja4g3005 541 Gene3D PRONE domain, subdomain 1 348 479 - -
Lja4g3005 541 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 116 474 IPR005512 GO:0005085
Lja4g3005 541 Coils Coil 400 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3005 Lja-Chr4 55734747 55741643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3005 - - aprc:113860057 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3005 4 55734747 55741643 Lja4g3005 4 55734747 55741643 ECH
Lja4g3005 4 55734747 55741643 Lja4g3005 4 55734747 55741643 PCT