Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2996 ATGGTTGATTCTCCAAGAGAAGTTATTGGCGCGGTTTTGAAGTATATGGGGGCTTCATACAACACAAATGACATTAATTTGGAAGTCAATGGTGGGAGAGATGCTGTTAAACATAATTTGGCTTTGCTTGGAAAACAGGTTCGACTCTTTGATAGTGCGAACTATCTAAAAGCTTTTGGAGTTGGAGATGTGTGGGTAGCTGTCGGATGGAGTAGCGATGTTATTCCTGTTGCTAAACGCATGTCTAATGTTGCAGTTATTGTTCCAAAGTCTGGAGCGAGTTTATGGGCAGATCTTTGGGCAATTCCTGCTGCTTCTGGGATTCAGACGGATCGGATTGGTGGGCGCATCAGGGGGCCATCCCCACTAATCCATCAGTGGATAGAGTTTTGTCTGCAATCCGCAAGAGCACTGCCCTTTAAGCAGGAGGTGGTCCCAGGTGCCTCTCCCTCTCTTCTTCAAGGTCATTCCGCCAATGTGTCCGTCGAGTTCAATAAAGGTAGGCCGAGGCTAAATACCAATCTCATTGAGGGAGCACCCCCACCAGACATTGTAGAAAGGTGTGAGTTTCTAGAGCCATTGTCTAATTCAACAGTGTCAGATTACCACTGGTTGATTGCCTCTATCCAGGAACCTGGCCATGGATTGATACACAAAATGCAGCAATATATTGCATCAGTGGTTAAATTTTCTTGGGGGTTTAATTCAAAGGTTACCTGA 720 0.4542 MVDSPREVIGAVLKYMGASYNTNDINLEVNGGRDAVKHNLALLGKQVRLFDSANYLKAFGVGDVWVAVGWSSDVIPVAKRMSNVAVIVPKSGASLWADLWAIPAASGIQTDRIGGRIRGPSPLIHQWIEFCLQSARALPFKQEVVPGASPSLLQGHSANVSVEFNKGRPRLNTNLIEGAPPPDIVERCEFLEPLSNSTVSDYHWLIASIQEPGHGLIHKMQQYIASVVKFSWGFNSKVT* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2996 239 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 1 222 - -
Lja4g2996 239 Pfam Bacterial extracellular solute-binding protein 30 136 - -
Lja4g2996 239 SUPERFAMILY Periplasmic binding protein-like II 1 106 - -
Lja4g2996 239 Gene3D - 1 116 - -
Lja4g2996 239 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 3 22 IPR001188 GO:0015846|GO:0019808|GO:0042597
Lja4g2996 239 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 89 108 IPR001188 GO:0015846|GO:0019808|GO:0042597
Lja4g2996 239 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 1 222 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2996 - - lja:Lj0g3v0075799.2 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2996 4 54989732 54990857 Lja4g2996 4 54989732 54990857 ECH