Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2989 ATGAGTCTTAATGATGGAAAACTGGACAAGAGCAGGATGGTCTCTGTGGCGGTCGTATTTGTGGTGTTATGTGGAGTTTCTTTCTATATGGGTGTAATATTTTGTTCTGAGAAAGATAGATTTGTCTCAATTAGTAGCCAGAACTCCCTTGAGTCTCCCAAGGAATCATCAATTAGTCCTCTGCAAATTAAAGACATCAGTTTTCCTGAATGCAGCATTGACTATCAAGATTACACTCCATGCACAGATCCAAGGGGATGGAAAAAGTATGGTACGCATCGGCTTACCTTCATTGAACGCCATTGCCCTCCAATTTCTGAGAGGAAAGAATGCTTAGTTCCTCCACCAGATGGGTATAAGTCTCCAATTAGATGGCCAAAGAGTAGAGATGAATGTTGGTACAGGAATGTTCCATATGACTGGATTAACAAGCAGAAGTCGAATCAACATTGGTTGAAAAAGGAAGGGGAGAAATTCCTCTTTCCTGGTGGGGGTACCATGTTCCCCAATGGTGTTGGTAAATATGTTGACTTGATGGAAGACCTGATCCCAGAAATGAAAGGCGGGACAATTCGAACTGCCATTGATACTGGATGCGGGGTTGCTAGCTGGGGTGGTGACTTGCTGGATCGTGGGATTCTAACTGTTTCTCTTGCCCCAAGAGATAACCATCAAGCTCAGGTTCAGTTTGCTCTGGAGCGTGGTATCCCTGCAATTCTTGGCGTCCTTTCTACTCAGAGACTTCCATTCCCATCAAACGCATTTGATATGGCTCATTGCTCCAGATGCCTCATCCCATGGACAGAATTCGGCGGAGTTTATCTCCTTGAGATACACCGGATTCTTCGTCCTGGAGGATTTTGGGTCCTGTCTGGTCCACCAATCAACTATGAGCGCAGATGGCGTGGCTGGAACACAACTATCCAAGAGCAAAAATCAAATTATGATAAGTTGCAGGAAATGTTGACTTCAATGTGCTTTAAAATGTACAATAAAAAGGGTGACATTGCTGTATGGCAAAAGTCTCCAGAAAATGATTGCTATAATAAGCTGCCTAAAGATACCTATCCACCCAAATGTGATGACAGCTTTGAACCAGATTCAGCATGGTATACTCCACTTCGTGCTTGTGTTGTGGTTCCCAATTCAAAGTTTAAGAAATTAGGTCTGCCTTCAATTTCTAAGTGGCCTGACCGGTTGCACGATACGCCTGAACGGATTTCAATGGTTTATCATGGGAGTGCTAGTGTTTTCAAACAAGATGACAGTAAGTGGAAAAAGAGTGTTAAGCATTACAAGAAGTTGATCCATGACCTTGGGACTGACAAAATAAGAAATGTGATGGACATGAATACGGTATATGGAGGTTTTGCTGCAGCCTTGATTGATGATCCCATATGGGTCATGAATGTGGTCTCATCTTATGCTGCCAATACACTCCATGTGGTTTATGATCGAGGCCTCATTGGAACGTACCATGACTGGTGTGAAGCTTTTTCAACATATCCTCGAACATATGACCTTCTTCATGTTGCTGGACTCTTCACTGCAGAAAGCCACAGATGTGAAATGAAGTATGTGTTGTTGGAAATGGATCGAATTTTACGACCCGGTGGGTACGCAATCATTCGTGAGTCCAGTTACTTTGTGGATCCCATTACAGCCTTTGCCAAGGGCATGCGATGGGAATGCCGTAAAGAAGAAACTGAGAAAGGCGGCGACACAGAAAAGATATTGATATGTAAGAAAAAGCTCTGGTATTCATCCATCAAAGGTTCAAGATGA 1785 0.4319 MSLNDGKLDKSRMVSVAVVFVVLCGVSFYMGVIFCSEKDRFVSISSQNSLESPKESSISPLQIKDISFPECSIDYQDYTPCTDPRGWKKYGTHRLTFIERHCPPISERKECLVPPPDGYKSPIRWPKSRDECWYRNVPYDWINKQKSNQHWLKKEGEKFLFPGGGTMFPNGVGKYVDLMEDLIPEMKGGTIRTAIDTGCGVASWGGDLLDRGILTVSLAPRDNHQAQVQFALERGIPAILGVLSTQRLPFPSNAFDMAHCSRCLIPWTEFGGVYLLEIHRILRPGGFWVLSGPPINYERRWRGWNTTIQEQKSNYDKLQEMLTSMCFKMYNKKGDIAVWQKSPENDCYNKLPKDTYPPKCDDSFEPDSAWYTPLRACVVVPNSKFKKLGLPSISKWPDRLHDTPERISMVYHGSASVFKQDDSKWKKSVKHYKKLIHDLGTDKIRNVMDMNTVYGGFAAALIDDPIWVMNVVSSYAANTLHVVYDRGLIGTYHDWCEAFSTYPRTYDLLHVAGLFTAESHRCEMKYVLLEMDRILRPGGYAIIRESSYFVDPITAFAKGMRWECRKEETEKGGDTEKILICKKKLWYSSIKGSR* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2989 594 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 423 561 IPR029063 -
Lja4g2989 594 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 9 590 IPR004159 GO:0008168
Lja4g2989 594 PANTHER PMT16, PUTATIVE-RELATED 9 590 - -
Lja4g2989 594 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 77 583 IPR004159 GO:0008168
Lja4g2989 594 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 308 IPR029063 -
Lja4g2989 594 Gene3D Vaccinia Virus protein VP39 173 349 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2989 Lja-Chr4 54875830 54880880 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2989 - - gmx:100820623 1053.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2989 4 54875830 54880880 Lja4g2989 4 54875830 54880880 ECH