Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2976 ATGGTTAACAATGGCTGCCTATGCTGTACTGTGCGAGGAGATCTAGTTAAAATGCTACTGGAGCTGGCTAGAAAAAAACGAGACGTTATTGATCATATTGTTATTGAAACCACAGGTCTGGCAAAGCCAGGCCCTGTTATTGAAACATTTTGCAGTGATGAACTGGTTTCTCAGTATGTGAAACTTGATGGAGTTGTAACTTTGGTTGACTGCAAGCATGCCATGCAACATTTAAATGAAGTAAAACCAAGATTTGTGGTTAATGAGGCAGTAGAACAAGTTGCATATGCTGACCGAATCATTTTGAACAAGATAGATTTGGTTTCTGAATCTGAGTTAAATGCACTAACTAAGAAAATTAAGCACATCAATGGAATGGCACAAATTAAGCAAGCTAAATTTGGATCTGTTGACATAGACTTTGTTCTGGGGGTAGGAGGATATGATCTTCAGAGAATTGAATCTGATGTCCATGGAGAGTGTCCCTCGTCGGCTAGCCATCAAGATGATTCCGGACATGAACACACAGGGCATCACCATCACGATCATGTACATGATTCTGCTGTCTCCAGTGTCAGTATTGTTGCAGAGGGAACCCTAGATCTTGATGAGGTTGACGATTGGCTTGAGAGGTTGGTTGAAGAAAAAGGAGAGGACCTATACAGAATGAAGGGTGTCTTGTCAGTGGATGGTTCTGATCAACGATATGTGCTTCAGGGGGTGCATTCCATATTAGATGGCAGCAAAGGAAAAGAATGGGAACCTGAAGAAAAGAGGATAAACAAACTTGTGTTCATTGGAAGGAATTTGGATGAAACCACCCTTAGAAAAGGTTTCAGAGGTTGTTTAGTCTAG 855 0.4117 MVNNGCLCCTVRGDLVKMLLELARKKRDVIDHIVIETTGLAKPGPVIETFCSDELVSQYVKLDGVVTLVDCKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVSESELNALTKKIKHINGMAQIKQAKFGSVDIDFVLGVGGYDLQRIESDVHGECPSSASHQDDSGHEHTGHHHHDHVHDSAVSSVSIVAEGTLDLDEVDDWLERLVEEKGEDLYRMKGVLSVDGSDQRYVLQGVHSILDGSKGKEWEPEEKRINKLVFIGRNLDETTLRKGFRGCLV* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2976 284 MobiDBLite consensus disorder prediction 167 187 - -
Lja4g2976 284 Gene3D - 169 283 IPR036627 -
Lja4g2976 284 Gene3D - 1 148 IPR027417 -
Lja4g2976 284 Pfam CobW/HypB/UreG, nucleotide-binding domain 2 129 IPR003495 -
Lja4g2976 284 Pfam Cobalamin synthesis protein cobW C-terminal domain 189 283 IPR011629 -
Lja4g2976 284 PANTHER OSJNBA0083N12.6 PROTEIN 1 284 - -
Lja4g2976 284 SUPERFAMILY Hypothetical protein YjiA, C-terminal domain 189 283 - -
Lja4g2976 284 PANTHER COBW-RELATED 1 284 - -
Lja4g2976 284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 140 IPR027417 -
Lja4g2976 284 MobiDBLite consensus disorder prediction 158 188 - -
Lja4g2976 284 SMART CobW_C_3 189 283 IPR011629 -
Lja4g2976 284 CDD CobW-like 2 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2976 Lja-Chr4 54593745 54599257 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2976 - - lja:Lj0g3v0024529.1 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2976 4 54593745 54599257 Lja4g2976 4 54593745 54599257 ECH