Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2904 ATGCATCACAGTCATCAATACCCTCTTCCTTGTTTGTATTGCCACCCATATAGCTATATTAGGATGGTTCAAAATCTCATAGAAAGATGCATGCTGTTTCACATGAGTCAAGACCAATGCATAAAGGCACTGGCAGAACATGCAGGGATTAAACCACTTGTAACAGTTACAGTGTGGAAAGAGTTGCAAAAGGAGAATAAGGAGTTCTTCAGAGCATATTTACAAGTTATCACTCCAAGGCCATTCATGAGTAGATATTTTCAAAGGGGACCAAGATATTTAGCAAGAAGGAGCCACTGGAAATAG 306 0.3954 MHHSHQYPLPCLYCHPYSYIRMVQNLIERCMLFHMSQDQCIKALAEHAGIKPLVTVTVWKELQKENKEFFRAYLQVITPRPFMSRYFQRGPRYLARRSHWK* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2904 101 Pfam Plant protein 1589 of unknown function (A_thal_3526) 23 73 IPR006476 -
Lja4g2904 101 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 20 74 IPR006476 -
Lja4g2904 101 PANTHER OS02G0137100 PROTEIN 2 91 IPR006476 -
Lja4g2904 101 PANTHER - 2 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2904 Lja-Chr4 52460532 52461487 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2904 - - lja:Lj0g3v0326379.1 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2904 4 52460532 52461487 Lja4g2904 4 52460532 52461487 ECH