Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2899 ATGGCAACAAACGAGAGAGAAGCTCCAATCCATGGAGACATCTTAGAGGCCATACTCTCGCACGTGCCTCTCATCCACCTTGTGCCAGCTCGTCACGTGTCAAAGTCCTGGAAGCGTGCCGTGTCTAGCTCCCTCCGCCACGTCAGCCCCGTCAAGCCGTGGCTCACGGTGCACACCCAGAGCCCCCGTGCCCCGCACGTGACAACCTCCCACGCGTACGATCCACGCTCACGCTCCTGGATTCAGATCCACGCGCCGCCCTCCAGCCAGTCTTCCTCCCCCCTCCGCTCGTCACACTCCACTCTCATCTACACCCTCTCACCCACAGGCTTCTCCTTCTCCCTCGACCCCCTAGGCCTCGAGTGGCACCACGCGCCACCCCCGCGGGTGTGGCGAGTTGACCCAGTCGTCGCCTGTGTTGGCGGATGCATCATCGTTGCCGGCGGCGCGTGCGACTTCGAGGACGACCCCCTGGCGGTTGAGATGTACGACGCGGGATCCCGCACTTGGTCCCGTTGCGAGTCCATGCCGGAGATCCTGAAAGGCTCCACGGCGTCGACGTGGCTCTCGGTAGCCGTCGCCGGTGACCGGGTGCACGTGACGGAGAAAAACTCCGGCGTGACGTACTCGTTTGACAGCGAGACGAAGTCGTGGCTGGGGCCGTACGAACTGCGGCCGGAGGAGGGCGTTTTCTACTGCGTCACGGGAACGGTGAGGGGGCGATTGGTGGTGGCGGGGATGGTCGGAGAAGCGGAGAACGTGAAAGGGGTGAAATTGTGGGAAGTGAAAGGGGAATTGGGGATAGGGTCGAAGTATTGGTGTGAGGAATTGGGGGCGATGCCGAAGGCTATGGTGGCGAAGATGAAGGGTGATGATGGTTGCGGTGTGATGGCGTCGATTTCGGTGACTACGGTGGGGGATTATGTTTATCTGGTGAACCTATGGGAACCGGAGGAGATGGTGGTGTGCGAGTTTGCAGACAGGGGAGGTTGCGCGTGGCGGAGCGTGAGGAATGAGGCGGTGGCGCGAATGGAGAGGATGGTGTTTTGCGGCGGATATGTGGGGGTGGAGGATTTGGAGTGCGCGGTGGCGCAGAAGAATTGCAAGTTTGCGTTGCAGTAA 1122 0.6141 MATNEREAPIHGDILEAILSHVPLIHLVPARHVSKSWKRAVSSSLRHVSPVKPWLTVHTQSPRAPHVTTSHAYDPRSRSWIQIHAPPSSQSSSPLRSSHSTLIYTLSPTGFSFSLDPLGLEWHHAPPPRVWRVDPVVACVGGCIIVAGGACDFEDDPLAVEMYDAGSRTWSRCESMPEILKGSTASTWLSVAVAGDRVHVTEKNSGVTYSFDSETKSWLGPYELRPEEGVFYCVTGTVRGRLVVAGMVGEAENVKGVKLWEVKGELGIGSKYWCEELGAMPKAMVAKMKGDDGCGVMASISVTTVGDYVYLVNLWEPEEMVVCEFADRGGCAWRSVRNEAVARMERMVFCGGYVGVEDLECAVAQKNCKFALQ* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2899 373 SUPERFAMILY Kelch motif 53 246 IPR015915 GO:0005515
Lja4g2899 373 Gene3D - 54 270 IPR015915 GO:0005515
Lja4g2899 373 Pfam F-box domain 13 47 IPR001810 GO:0005515
Lja4g2899 373 SUPERFAMILY F-box domain 13 44 IPR036047 GO:0005515
Lja4g2899 373 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 4 363 - -
Lja4g2899 373 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 4 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2899 Lja-Chr4 51567685 51569292 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2899 - - adu:107481346 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2899 4 51567685 51569292 Lja4g2899 4 51567685 51569292 ECH