Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2895 ATGCAATGCAAGTTTTTGGCTATGGAGTACTTGAAGAAACTCACATTCTCTGACCCTTTTTTGTCACACAGAAGAAAAGTGTTTTCTGGGTTTGGTTTGAGTTTGGGTATTGGAGCTTCTCTGCTTCTGTGCTCTCTGTTCTTTTTCATTAATCCCTTCTGGGTCCCCAAAGTTCAAGTGTTTCTGCCAGAATTTAACACTACTAGTGAAGATTCTTTGTTTGCTTCACCCCCCTCTTCATTCAACACTAGCCAGTTTAATTATTCCTCTGAAAACAACACTTCTGTTACTTCATTTTCCCAACATTATGAGGGCACTGTAGAAAATGTTGTTGAGGGTAGAACTGGTCAAGTGAATGTGTCAGGTATTAGATTGGGACCAGATGTTGACATGAATAATGTTAGTTTTGGTCTTAAAGTGGGGGGAAATGTGGGCAATGCTTCATGCAATGGTGTAGAGGGAAGGAAAGAGGGGAGTTTGGTTGGGGAAAAGAATGTAACTGTTATTGATAATGGTTCCCAAGTAGTGGAGAAAATGAAAGTTAGTTTTTATGAGGAGTGTGATATCTTTGATGGGAAGTGGGTGAGGCATGATTCAAAGCCATACTATCGTTTAGGGTCTTGTCCCTTCATCGATAGGGACTTTGATTGTCACCGGAATGGGAGGCCTGATCTAGATTATGTGAAATGGAAGTGGCAGCCAAATCAGTGTGACATTCCAAGTTTGAATGCAACTGATTTTCTGGAGCGGTTGCGCGGCCAGAGGCTGGTTTTTGTGGGGGATTCATTGAACAGGAACATGTGGGAGTCTCTGGTCTGTACCCTCCGTCACAGTATCAGGAAGAAAAAGAAACATGTTTATGAAATTTCAGGAAGAACCGAATTTAAGAAGAAAGGTGTCTATTCTTTTAGATTTGAGGATTATAATTGTTCGGTGGATTTTGTTGCGTCACCGTTCATTGTTCGAGAGTCCACTTTCAAAGGAAAAAATGGGTCATTTGAGACATTAAGATTGGATTTGATGGACCTCTCAATTACCAAGTATCAGGATGCTAATATCATAGTCTTCAATACAGGCCATTGGTGGACTCATGAGAAAACATCAAAAGGAGAAGATTATTATCAAGAGGGAAACCATGTATACCCTAGACTCAAGGTTTTGGATGCATATACAAGGGCTTTGACCACTTGGGCTAAATGGGTTGACCAGAACATTGATGCCAATCAAACTCAGGTTTTCTTCAGAGGATATTCAGTTACACATTTCTGGGGTGGGCAATGGAATTCTGGAGGACAGTGCCATAAAGAAACTGAGCCAATATTTAACAAAACTTACTTACAAAAGTACCCTTCGAAAATGCGGGCTCTAGAGAATGTCATAAAAAACATGAAAACCTCAGTGATATATCTGAACATAAGTAGACTTACAGATTTCAGAAAAGACGCACATCCTTCGGTATACAGAAAGGAGTACAAGATCTCAATGGAGCAGAACACTACTGCACCATTTGAGGATTGCAGCCATTGGTGCTTGCCTGGTGTACCGGATACTTGGAATCAACTGCTATATGTTTCTCTCTTAAAAAGAGGGAAGGGAACATGGAAAAGCTGA 1611 0.4066 MQCKFLAMEYLKKLTFSDPFLSHRRKVFSGFGLSLGIGASLLLCSLFFFINPFWVPKVQVFLPEFNTTSEDSLFASPPSSFNTSQFNYSSENNTSVTSFSQHYEGTVENVVEGRTGQVNVSGIRLGPDVDMNNVSFGLKVGGNVGNASCNGVEGRKEGSLVGEKNVTVIDNGSQVVEKMKVSFYEECDIFDGKWVRHDSKPYYRLGSCPFIDRDFDCHRNGRPDLDYVKWKWQPNQCDIPSLNATDFLERLRGQRLVFVGDSLNRNMWESLVCTLRHSIRKKKKHVYEISGRTEFKKKGVYSFRFEDYNCSVDFVASPFIVRESTFKGKNGSFETLRLDLMDLSITKYQDANIIVFNTGHWWTHEKTSKGEDYYQEGNHVYPRLKVLDAYTRALTTWAKWVDQNIDANQTQVFFRGYSVTHFWGGQWNSGGQCHKETEPIFNKTYLQKYPSKMRALENVIKNMKTSVIYLNISRLTDFRKDAHPSVYRKEYKISMEQNTTAPFEDCSHWCLPGVPDTWNQLLYVSLLKRGKGTWKS* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2895 536 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 18 534 - -
Lja4g2895 536 Pfam PMR5 N terminal Domain 185 238 IPR025846 -
Lja4g2895 536 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 239 523 IPR026057 GO:0016740
Lja4g2895 536 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 18 534 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2895 Lja-Chr4 51338304 51343586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2895 - - gmx:100811395 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2895 4 51338304 51343586 Lja4g2895 4 51338304 51343586 ECH