Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2890 ATGAGTCACAGCATCTTCCACCAGACTCTGCTTTGTCAAACGCAGACGGTTGCGGAGCACCAAAGCAAGGTGAGTTCTCGCGGAAGCACTTTATTCCCAGCGCTGAGTGTCAGCAAAGGCAAGAAGCTTGTACTCTCTACAAATCTCCGCGGGAACAGGTTGTGCTTGAGGAAACGGAGATTCGCCATGGGAAGAAACCGCAACACTGTGGCTATTCCGCGTGCTGTGTTAACCTCGAATGCTGCTTCTGAGCTTTCAGGGAAGTTCAACCTTGATGGAAACATTGAATTACAGGTTGGTGTTAGTTCTTCAGGACCAGGAGGTGCAACACAAGTAGATATTCAAGTTTCAAATAAAAGTGGTTCTTTGATTTTACATTGGGGAGTTTTACATGAAAGTCAAGGGAAGTGGGTACTTCCTTCTCGCCACCCAGATGGAACTCAAGTTTATAAGAACAGAGCTCTTAGAACTCCTTTTGTGAAATCTGGCTCTGGATCCTTCCTTAAAATAGAAATTGATGATCCTGCTGCACAAGCCATAGAGTTCCTTATACTTGATGAATCTCAGAATAAGTGGTTTAAAAACAATGGTGAGAACTTTCACATCAAGTTACCAGGAAAAGATGAGGGAGTTCAACAAGGCTCAGTTCCTGAAGACCTTGTACAAGTTCAAGCATATCTTAGGTGGGAGCGAAATGGTAAGCAGATGTACACTCCAGAGAAAGAGAAGGAGGAATATGAAGCAGCTCGACAAGACCTATTGAAAGAAGTAGCTAGAGGTATTTCTGTGCAAGACCTCCGCGCAAGGTTGACTAACAAAGCCAACACTGCTGAAGTAAAGCAGCCTTCGGTTTCTGGAACCAAGAACATCCCTGATGAACTTGCACAGGTTCAAGCTTATATACGCTGGGAAAAAGCTGGGAAGCCTAACTACTCTCCGGAACAACAACTTATCGAATTTGAAGAAGCAAGAAAAGAATTGCTAGGTGAGCTTGAGAAAGGTGCTTCTCTAGATGAAATACGGAAGAAAATTGTCAAAGGGGAGGTACAAACTAAAGTTGCCAAGCAGTTGAAAACCAAAAAATACTTCCATGTTGAAAGAATACAAAGGAAAAAGAGAGATTGGACGGAGCTTATCAACAGAAATGTTGGGGAAAATATAGTTGAACAATTTGTAGATGTTCCAAAGACAATGACAGTGATTCAACGCTATGCCAAGGAAAAGGAAGAATATGATAAAGGTCTTATTTTGAATAGGGCAATTTACAAGCTTGCTGATAATGATCTTCTGGTCCTCGTTACCAAAGATGCTGGTAACATTAAGGTTCACCTGGCTACAGACTCCAAATCACCTGTTACACTTCACTGGGCCTTATCAAGATCAACACCTGGAGAGTGGTTGGTGCCACCTGCAAGTGCTCTGCCCCCTGGATCTGTTATTATGGATAAGGCTGCTGAAACACCTTTTAATCCTGGTTCCCCGTCTCATCCTTCCTTTGAGGTCCAGTCCTTAGATATAGAGGTCGATGGCGATACTTTTAAAGGAATAACTTTTGTCACTCTGTCAGATGGAAAATGGATAAAGAACAATGGATCAGATTTTTATGTTGAATTTAGTGAGAAGAAGAAGATACAAAAGGCTTCTGGTGATGGCAAAGGTACAGCCAAGTTCTTGTTGGATAGAATAGCTGAAATGGAAAGTGAGGCACAAAAGTCCTTTATGCATCGATTTAACATTGCATCGGAATTGATGGATCAAGCCAAAAATGCTGGTCAATTGGGTCTTGCGGGCATTTTGGTTTGGATGAGATTTATGGCTACAAGGCAGCTTATATGGAACAAAAATTATAATGTGAAGCCACGTGAGATAAGTCAAGCACAGGATAGGCTTACAGACTTGCTCCAGGATGCCTATACGAGTTATCCACAGTATAGAGAGCTTGTGAGGATGATCCTTTCTACTGTTGGTCGTGGAGGTGAAGGTGATGTGGGACAGCGGATTCGAGATGAAATCCTTGTTATCCAGAGAAAGAATGAATGCAAGGGAGGAATGATGGAGGAATGGCACCAGAAGTTACACAATAATACTAGTCCTGATGATGTTGTAATTTGTCAGGCACTGATTGATTATATAAATAATGACTTTGATATTGGAGTTTACTGGAAAACATTGAATGACAATGGAATAACAAAAGAACGTCTTTTGAGCTATGACCGTGCCATCCACTCTGAACCAAATTTTAGGAGGGATCAGAAGGAAGGTCTTTTGCGAGATCTGGGAAACTACATGAGGACACTGAAGGCAGTTCATTCAGGTGCAGATCTTGAATCTGCAATTACAAATTGTTTAGGCTACAAATCTGAGGGTCAGGGCTTCATGGTGGGGGTGCAGATAAATCCAGTGTCTGGTTTGCCATCTGGTTTTCCTCAATTAGTTCAGTTTGTGATGGAACACGTTGAAGTTAAATATGTTGAACCACTTCTTGAGGGTTTGCTAGAGGCTCGTCAGGAACTCCGACCATCACTCAATAAGTCTCAAAGTCGTCTGAAAGATCTTTTATTTTTGGATGTTGCTCTGGATTCCACAGTTAGAACAGCAGTGGAAAGGGGATATGAAGAATTAAACAATGCAGGGCCTGAGAAAATAATGTACTTTATCTTCTTGGTTCTTGAAAATCTTGCACTTTCATCGGACAATAATGAAGATCTTATCTACTGTTTGAAGGGATGGGAAATTGCCTTAAGCATGTGCAAGAGTAAAGACACTCATTGGGCATTGTATGCAAAATCAGTCCTTGACAGAACACGCCTTGCACTCGCAACCAAGTCAGAGGAATACCATAATATTCTGCAACCATCAGCAGAATACCTTGGATCACTACTTGGTGTGGAAACATGGGCTGTGGAAATATTTACGGAAGAAATTATCCGTGCTGGATCTGCTGCTTCTTTGTCTGCACTTCTAAATCGACTTGATCCTGTACTCCGAAAGACAGCTAATCTTGGAAGCTGGCAGGTTATTAGCCCTGTTGAAACGATTGGATATGTTGTGGTTGTGGATGAGTTGCTTTCTGTTCAAAACAAATCATATGAGAGGCCTACAATTTTGATAGCCAAGAGTGTGAGAGGAGAGGAAGAAATTCCAGATGGTGCAGTTGCTGTCCTGACACCAGATATGCCAGATGTCCTATCTCATGTTTCTGTTCGAGCAAGAAATAGCAAGGTGTGTTTTGCCACATGCTTTGACCCCAGTATCCTTGCTGACCTTGAATCAAAGAAGGGAAAGCTCTTGAGCTTGAAGCCTACATCTGCAGAAGTAGTTTATAGTGAGGTCAACGAGGGTGAGCTTATTGATGAAAAATCAAGTCACCTGAACGAAGTTGGTTCTGTGCCATCCATATCTTTGGTCAAAAAGCAGTTTAGTGGAAGATATGCTGTCTCATCTGAAGAATTCACTGGGGAAATGGTTGGTGCTAAATCTCGTAATATCTCTTATTTAAAAGGAAAAGTACCTTCTTGGATTGGAATTCCTACCTCAGTTGCCCTACCATTTGGAGTTTTTGAGCATGTCCTTTCTGACAAATCAAATCAGGTAGTGGCTGAGAAGGTTAATGTTTTGAAACGGAAGTTAACTGAGGGAGACTTCAGTGCCCTCAAGGATATTCGTGAAACAGTTTTACAGTTGAATGCGCCACCCCAGCTGGTAGAGGAGTTGAAAACTAAGATGAAGAGTTCTGGAATGCCTTGGCCGGGTGATGAAGGCGAACAACGCTGGGAACAAGCATGGAAAGCTATAAAAAAGGTATGGGGCTCAAAGTGGAATGAAAGAGCATACTTCAGCACGAGAAAAGTTAAGCTTGATCATGATTATCTTTCCATGGCTGTCCTTGTGCAAGAAGTGGTAAATGCTGACTATGCTTTTGTAATCCACACAACTAATCCATCTTCCGGAGACTCCTCAGAAATATATACGGAGGTGGTAAAGGGACTTGGAGAAACACTAGTTGGAGCTTATCCTGGTCGTGCTTTGAGTTTTATCTGCAAAAAACATGATTTGGACTCCCCTCAGGTCTTGGGTTATCCTAGCAAACCTATCGGTCTGTATATTAGAAGGTCAATTATTTTTCGGTCGGATTCCAACGGTGAAGATCTAGAAGGTTATGCTGGTGCTGGCCTCTATGACAGTGTGCCTATGGATGAAGAGGAGAAAGTTGTACTTGATTACTCATCAGATCCGCTGATTGTTGATGGTAGTTTTCGCAAGTCAATCTTGTCAAGCATTGCCCGAGCAGGAAATGCAATTGAAGAGTTGTATGGCTCTCCTCAGGACATTGAAGGTGTCATCAGGGATGGAAAAGTCTATGTTGTGCAGACCAGACCACAAATGTAG 4389 0.4226 MSHSIFHQTLLCQTQTVAEHQSKVSSRGSTLFPALSVSKGKKLVLSTNLRGNRLCLRKRRFAMGRNRNTVAIPRAVLTSNAASELSGKFNLDGNIELQVGVSSSGPGGATQVDIQVSNKSGSLILHWGVLHESQGKWVLPSRHPDGTQVYKNRALRTPFVKSGSGSFLKIEIDDPAAQAIEFLILDESQNKWFKNNGENFHIKLPGKDEGVQQGSVPEDLVQVQAYLRWERNGKQMYTPEKEKEEYEAARQDLLKEVARGISVQDLRARLTNKANTAEVKQPSVSGTKNIPDELAQVQAYIRWEKAGKPNYSPEQQLIEFEEARKELLGELEKGASLDEIRKKIVKGEVQTKVAKQLKTKKYFHVERIQRKKRDWTELINRNVGENIVEQFVDVPKTMTVIQRYAKEKEEYDKGLILNRAIYKLADNDLLVLVTKDAGNIKVHLATDSKSPVTLHWALSRSTPGEWLVPPASALPPGSVIMDKAAETPFNPGSPSHPSFEVQSLDIEVDGDTFKGITFVTLSDGKWIKNNGSDFYVEFSEKKKIQKASGDGKGTAKFLLDRIAEMESEAQKSFMHRFNIASELMDQAKNAGQLGLAGILVWMRFMATRQLIWNKNYNVKPREISQAQDRLTDLLQDAYTSYPQYRELVRMILSTVGRGGEGDVGQRIRDEILVIQRKNECKGGMMEEWHQKLHNNTSPDDVVICQALIDYINNDFDIGVYWKTLNDNGITKERLLSYDRAIHSEPNFRRDQKEGLLRDLGNYMRTLKAVHSGADLESAITNCLGYKSEGQGFMVGVQINPVSGLPSGFPQLVQFVMEHVEVKYVEPLLEGLLEARQELRPSLNKSQSRLKDLLFLDVALDSTVRTAVERGYEELNNAGPEKIMYFIFLVLENLALSSDNNEDLIYCLKGWEIALSMCKSKDTHWALYAKSVLDRTRLALATKSEEYHNILQPSAEYLGSLLGVETWAVEIFTEEIIRAGSAASLSALLNRLDPVLRKTANLGSWQVISPVETIGYVVVVDELLSVQNKSYERPTILIAKSVRGEEEIPDGAVAVLTPDMPDVLSHVSVRARNSKVCFATCFDPSILADLESKKGKLLSLKPTSAEVVYSEVNEGELIDEKSSHLNEVGSVPSISLVKKQFSGRYAVSSEEFTGEMVGAKSRNISYLKGKVPSWIGIPTSVALPFGVFEHVLSDKSNQVVAEKVNVLKRKLTEGDFSALKDIRETVLQLNAPPQLVEELKTKMKSSGMPWPGDEGEQRWEQAWKAIKKVWGSKWNERAYFSTRKVKLDHDYLSMAVLVQEVVNADYAFVIHTTNPSSGDSSEIYTEVVKGLGETLVGAYPGRALSFICKKHDLDSPQVLGYPSKPIGLYIRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEEEKVVLDYSSDPLIVDGSFRKSILSSIARAGNAIEELYGSPQDIEGVIRDGKVYVVQTRPQM* 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2890 1462 Gene3D - 1137 1300 IPR013815 GO:0005524
Lja4g2890 1462 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 1154 1461 - -
Lja4g2890 1462 PANTHER ALPHA-GLUCAN WATER DIKINASE 1, CHLOROPLASTIC-RELATED 46 282 - -
Lja4g2890 1462 PANTHER ALPHA-GLUCAN WATER DIKINASE 1, CHLOROPLASTIC-RELATED 287 1462 - -
Lja4g2890 1462 Pfam Pyruvate phosphate dikinase, AMP/ATP-binding domain 1259 1461 IPR002192 GO:0005524|GO:0016301|GO:0016310
Lja4g2890 1462 Gene3D - 1301 1461 - -
Lja4g2890 1462 PANTHER ALPHA-GLUCAN WATER DIKINASE 1, CHLOROPLASTIC 46 282 - -
Lja4g2890 1462 PANTHER ALPHA-GLUCAN WATER DIKINASE 1, CHLOROPLASTIC 287 1462 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2890 121 281 Glycoside Hydrolase AT1G69830 28.144 2.50e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2890 K08244 - gmx:100802675 2447.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2890 4 51104831 51136581 Lja4g2890 4 51104831 51136581 ECH