Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2889 ATGGAAACGAAACTCTTGTGTTTTCTTTATTATTTGTACATGACCATATGTTGCTGCTGTGGCAAAATAGTGCACGCTATTGAATCCCCAAAATATACAGTGATATTTTCAGAATCAAATTTTCAGATCAGACTCTACGATGAATCTTTATGGATGTCTGCTCCTGTTTCAGGAACTTCCTTCGAACAATCCACCAAAACCGGATTTCACAGGTTGTACCAATATATCCATGGTGCCAATTTGAATTCTTCCAAACTTGCATTCACTAGTCCAGTCTTAACGAGGATTCCCTCACCATCCTCTCAGGATGGCTATACAGTGAGAATCTATGTATCGCCTCACTTTCAGGGGAAACCTCCACTGCCTAATCCTGAACTGAAGTTGCAGGTAGAGAAATGGAAAACTCAATGCTTAGCAGTGTTGAAGTTCAGTGGGTATGCGAAGGACAGTGACATTAGCAGAGAATTTGAAGCTCTTGCTAGCAGCCTAAACAAGCATTTCAATAGAAGTTCAGGGACAATACAAGATGCAAGCTCCTATACTATTGCTCAGTACAATGCTCCAATTCGTAATAGCGGGCGCTTAAATGAAGTGTGGCTAAAAGTGTCGGGACTCGAAAACTGTTGA 627 0.4115 METKLLCFLYYLYMTICCCCGKIVHAIESPKYTVIFSESNFQIRLYDESLWMSAPVSGTSFEQSTKTGFHRLYQYIHGANLNSSKLAFTSPVLTRIPSPSSQDGYTVRIYVSPHFQGKPPLPNPELKLQVEKWKTQCLAVLKFSGYAKDSDISREFEALASSLNKHFNRSSGTIQDASSYTIAQYNAPIRNSGRLNEVWLKVSGLENC* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2889 208 SUPERFAMILY Probable bacterial effector-binding domain 19 202 IPR011256 -
Lja4g2889 208 PANTHER HEME-BINDING PROTEIN-RELATED 1 206 IPR006917 -
Lja4g2889 208 Pfam SOUL heme-binding protein 27 200 IPR006917 -
Lja4g2889 208 Gene3D Regulatory factor, effector binding domain 26 206 IPR011256 -
Lja4g2889 208 PANTHER SOUL HEME-BINDING PROTEIN-RELATED 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2889 Lja-Chr4 51097031 51103219 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2889 - - adu:107481357 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2889 4 51097031 51103219 Lja4g2889 4 51097031 51103219 ECH