Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2888 ATGAATATGGAGCTCGATTCGTTTCCGTGGTCAAAGCCAAAATCTAGGAACACAAAGTTCTGTTTTGTTGATGTACGGAGCAGACAACATAAACGTGGACAAGCACCAACAAATTTGGCCACAGAAACAAGCCACAGAAGTTTCTCAGACATGGATTTTAGCTCCCCAATCATCAATCTCCTTGTACATTTTCTTCTTATTTTTTCATTGCTTTGTCCTGTTCATTCTTCACAAAATCAGACTTTTAAACCAGAGGAAGAGTTGCACAAGTTGAAATCCACAATAAGAACTCGTCTTCAACAGATAAACAAGCCTGCCATTAAGACAATTCAGAGTCCTGATGGTGATATAATAGACTGTGTTGTATCCCATAAGCAGCCAGCTTTTGATCATCATCTATTGAAAGGGCATAAGCCATTGGACCCTCCAGAGAGGCCTAGAGGCCATGATCAAATGGGAATTTTGAATGAGGAATTTCAGTTGTGGAGGCTATCTGGTGAAACATGTCCAGAAGGAACAATTCCAATAAGAAGAACAACAGAGCAAGACATGCTAAGAGCAAGCTCTGTTAATGGATTCGGAAGAAAATTTGTGAGAAGTGTCACAAGAGACACCAATGGCAATGGACATGAGCATGCAGTTGGGTATGTGAGTGGGGATCAGTACTATGGAGCAAAGGCCAGCATAAACGTGTGGGCCCCACATGTGGAAAACCAATATGAATTCAGCTTATCTCAAATGTGGATCATCTCTGGCACATTTGAGGAGGATCTAAACACCATTGAAGCTGGTTGGCAGGTCAGCCCTGAGCTCTATGGGGACAGCTACCCTAGATTCTTTACTTATTGGACGAGTGATGCATATCAAGCAACCGGGTGCTACAATTTACTTTGCTCAGGATTTGTTCAAACTAATAGCAAAATTGCAATTGGTGCTGCTATCTCTCCAACTTCTTCATATGATGGTGGGCAATTTGATATTAGCTTACTTGTCTGGAAGGATCCAAAGCATGGAAATTGGTGGCTTGAATTCGGATCAGGGATCCTAGTTGGGTACTGGCCATCATTCTTGTTCACCCATTTAGGGGATCATGCAAGCATGGTTCAATTTGGTGGAGAAATTGTGAATTCAATGTCATCAGGTTCTCACACTTCCACCCAAATGGGTAGTGGGCATTTTGCTGAAGAGGGTTTTGCAAAAGCATCATATTTTAGGAATTTGCAGGTTGTGGACTTTGATAACAACTTGGTTCCATTGTCAAATCTCAAGGTTCTAGCAGACCATCCGAATTGTTATGACATACAAGGAGGGCTCAATAATGCCTGGGGGAATTACTTTTACTATGGTGGTCCTGGCAGAAATGTGAAGTGTCTCTAA 1377 0.4198 MNMELDSFPWSKPKSRNTKFCFVDVRSRQHKRGQAPTNLATETSHRSFSDMDFSSPIINLLVHFLLIFSLLCPVHSSQNQTFKPEEELHKLKSTIRTRLQQINKPAIKTIQSPDGDIIDCVVSHKQPAFDHHLLKGHKPLDPPERPRGHDQMGILNEEFQLWRLSGETCPEGTIPIRRTTEQDMLRASSVNGFGRKFVRSVTRDTNGNGHEHAVGYVSGDQYYGAKASINVWAPHVENQYEFSLSQMWIISGTFEEDLNTIEAGWQVSPELYGDSYPRFFTYWTSDAYQATGCYNLLCSGFVQTNSKIAIGAAISPTSSYDGGQFDISLLVWKDPKHGNWWLEFGSGILVGYWPSFLFTHLGDHASMVQFGGEIVNSMSSGSHTSTQMGSGHFAEEGFAKASYFRNLQVVDFDNNLVPLSNLKVLADHPNCYDIQGGLNNAWGNYFYYGGPGRNVKCL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2888 458 Pfam Neprosin 240 451 IPR004314 -
Lja4g2888 458 Gene3D - 232 346 - -
Lja4g2888 458 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 55 456 - -
Lja4g2888 458 PANTHER PEPTIDASE, PUTATIVE (DUF239)-RELATED 55 456 - -
Lja4g2888 458 Pfam Neprosin activation peptide 109 216 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2888 Lja-Chr4 51046213 51050868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2888 - - gmx:100776135 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2888 4 51046213 51050868 Lja4g2888 4 51046213 51050868 ECH