Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2830 ATGGGTAAGCATCTTTTGCTACTGGGTTTCACTCTTCAGCTCCTGGTTGGCACCCTCTCAGTCTCAGCTGCACCCTCCACCACTTCCCCTGCAAAAATTGTTAGTGGGTTCGTCTCTAATGCTGTGCCTGCTTTCACCAAATGGGTATGGTCACTCAAGGCCACCACCAGAACGGCGGTTTCCAGCAGGTCGATGATGAAGTTCGAGAGTGGGTACAGTGTGGAGACTGTGTTTGATGGAAGCAAGCTCGGAGTTGAGCCTTATGCTGTTGAGGTGTTGCCTAATGGGGAGCTTCTGATTCTGGATTCTGCTAATAGTAACCTTTACAGAATCTCCTCCTCACTTTCTCTGTATAGCAGACCAAAGCTGGTGGCTGGATCAGCTGAAGGATATTCTGGACATGTTGATGGGAAGCTTAGAGAGGCTAGAATGAACCAGCCAAAGGGAATAACTGTTGATGACCGAGGAAATATTTATGTTGCAGATACTATGAATATGGCAATTAGGAAAATTAGTGATTCAGGGATCACAACGATTGCTGGAGGAAAATGGAGCCGTGGAGGGGGCCATGTTGATGGACCAAGTGAAGAAGCTAAATTTTCTGATGACTTTGATGTGGTTTATGTTGGAAGCAGTTGTTCTCTACTCATTGTAGATAGAGGAAACCGAGCTATCAGAGAGGTCCAACTCCACTTTGATGACTGTGCTTATCATTATGGAAGTGGATTCCCACTTGGTATTGCCATGCTTGTTGCGGCTGGGTTCTTTGGGTATATGCTGGCATTGCTGCAGCGTCGGCTTGGTACAATTGTGGCATCCCAGGATGCCCCGGTTCCGGTAACAGTGAGGTCTTCTGTTTCCCCAAGTCCATATCAGAAGCCCTTGAAATCTGTCAGGCCTCCTTTAATTTCATCTGAATATGAACATGATAAGCAGGAAGAAGGTTTCTTTGGATCACTTGCGAAGCTTCTTGCGAATGCTGGTGCATCAATGGTGGAGATAATGGGAGGATTATTTCCAGCTTTCAGAAGAAAACCACAGAGCTACCAATTTCAAAGGCAACAGCTGCTCCAACAACCTCCAAAGCAAGTAAATGATTGGCCTGCACAGGAAAGTTTCGCGATTCCCCGTGAAGATGAGCCCCCTTCTATCGACCCAAGAACCCCAACCCCTCGAAAAACTTACCCTTTCATGTCTAAGGATGCTGAGAAAATGCAGCAGTTACGGCAAAGTAGAGCGTTCTATAGCAGTGGATGGGATGGAGATCTTCAGCAACAACAGAGACATCATCATCGCCATCAGTATAGTTCATCAGTCCCTCATACTTACTATGAACAGAGCCATGAAACCACTAATGAGATAGTTTTTGGGGCAGTGCAGGAACAGGACAGGAATCAGGAGTCTGTTATCAAGCATGTGGAATATGGGGGCTCATTGTTTGAACATAACAATATTCGGCCTCGAATGAGTTCTTTGGGTTATGCCCACAAGTACTAA 1497 0.4616 MGKHLLLLGFTLQLLVGTLSVSAAPSTTSPAKIVSGFVSNAVPAFTKWVWSLKATTRTAVSSRSMMKFESGYSVETVFDGSKLGVEPYAVEVLPNGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKLREARMNQPKGITVDDRGNIYVADTMNMAIRKISDSGITTIAGGKWSRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLIVDRGNRAIREVQLHFDDCAYHYGSGFPLGIAMLVAAGFFGYMLALLQRRLGTIVASQDAPVPVTVRSSVSPSPYQKPLKSVRPPLISSEYEHDKQEEGFFGSLAKLLANAGASMVEIMGGLFPAFRRKPQSYQFQRQQLLQQPPKQVNDWPAQESFAIPREDEPPSIDPRTPTPRKTYPFMSKDAEKMQQLRQSRAFYSSGWDGDLQQQQRHHHRHQYSSSVPHTYYEQSHETTNEIVFGAVQEQDRNQESVIKHVEYGGSLFEHNNIRPRMSSLGYAHKY* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2830 498 PANTHER - 1 498 - -
Lja4g2830 498 Gene3D - 37 229 IPR011042 -
Lja4g2830 498 PANTHER NHL REPEAT PROTEIN 1 498 - -
Lja4g2830 498 SUPERFAMILY NHL repeat 73 230 - -
Lja4g2830 498 Pfam NHL repeat 145 170 IPR001258 GO:0005515
Lja4g2830 498 MobiDBLite consensus disorder prediction 376 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2830 Lja-Chr4 47667208 47671081 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2830 - - gmx:100781836 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2830 4 47667208 47671081 Lja4g2830 4 47667208 47671081 ECH