Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2813 ATGGAGGAACAACAGCAGCAGAAACGCCCTCTCAATATTGACTGGAACTCCCTCATCGACAACACGCCGCCGGCGGTGTTGGTGGTGGAGCCGCCGATGGCCTCCGATCAGCCGCCACACTCGGCCTCCTTTGGCGGCGGCCTCGACTCCCTCACAGATCACCAACTCAGGGAAAACATTGCCAGAAGGAAGAATACCTACCAAAATACAGGAAAAAACTTGCCCGACGGTGGTGCCAAACTTCTCTCCGCCATCGAACGATTCGAAGAAGAGCTCAGCCGCCGTGAAGCTAACCCTCGTCCCAAGAAAGAGCAGAAGAAGGCCGAACAAGCAGGTACAAGCTCAGTTGCTGATGGCGTGTCTTACGACTTGAGACACGAGAATGTGTCATCTCAAGCACAGCCACAATCCACTTTTGCATCTTGTTTTATGAAGAAAATTAAAGATGATAAGCAGAGTAATTTGAAACATTGCAACAGCCAGATAATACGTGACGATCGAGAACCTAAAGGAAGAAAGAGGCAGCGATCATCTTCAAGACAGTTTCCATTTCAATGCCCTAGCAGTCGTTCCAAGCGTGGTTATGATGATAAAATTTCAAGAGCAACTTCCGCTATCTCCCTGCAGAAACTTGACAGACACCTGTCAAGACGCTACCCAAAAGGGAAGGATGCTTTTCAGACAATGCAATCAGATGGCTCAAGGTCCAGGAATGGTCAGCCCATTGTTCTTGACGATGATGACGATGACGATGATGAACCTCTTATTTTGGAGAACACAGAAAATAAACTTTCTGAATACTTGAAAGAAGCTAAGATCTATTTTCCATCAAGAGATGATCCAGAGTGTGTAGAAATTTGTTACAAAGACACAGATTGCCTTGCCCCTGAAGGCTATTTATCATCAACTATTATGAACTTCTACATACGATATTTGCAGCAGCAAGCATCTTTGACAAATAGTTCTTTATCTGACTACCATTTCTTCAATACATATTTCTACAAGAAGCTCAAAGAAGCTGTTTCCTGCAAGCAAAGTGACAGAGAGACAATCTTTGTGAAGTTCAGAAGGTGGTGGAAGGGTGTAAATATTTTTCAGAAGGCATATGTTTTGATTCCAATACATGAGGATCTTCATTGGAGCTTGATCATTATTTGTATCCCGGACAAAGGAGATGAATCGGGGCCAATCATACTTCATTTGGATTCTTTGGGTCTTCACTCTAGTCAATCAGTTTTTGACAATATTAAAAGCTATCTGATTGAAGAAAAGAAATATATGGATCGAGATTGTGTCTACTCAGATGTTTCAATTGCGGACAGGATATGGAAGTGCCTTTCTCGTAGAATTGAAGCTCAAGTCATCACGGTCCCCCAACAGAAGAACGAGTATGATTGTGGTCTTTTTGTATTGTACTTCATTAAGCGTTTCATGGAAGAGGCGCCGGAAAGACTGAAAAAGAAAGATTTAGATATGTTTAGCAAGCGATGGTTCAGACCTGAAGAGGCATCCAGTTTGAGAGTGAAAATCAAGAAATTGCTTATAGAAGAACTACAAAATTCAATTAGCCATAATTGTATCTCAGAATCTTCTCCAGCATCTTCTGGCAATGCAACCGAAGGGGTTGAGACTGCCCAGGATTCTTTGACCTAA 1653 0.4295 MEEQQQQKRPLNIDWNSLIDNTPPAVLVVEPPMASDQPPHSASFGGGLDSLTDHQLRENIARRKNTYQNTGKNLPDGGAKLLSAIERFEEELSRREANPRPKKEQKKAEQAGTSSVADGVSYDLRHENVSSQAQPQSTFASCFMKKIKDDKQSNLKHCNSQIIRDDREPKGRKRQRSSSRQFPFQCPSSRSKRGYDDKISRATSAISLQKLDRHLSRRYPKGKDAFQTMQSDGSRSRNGQPIVLDDDDDDDDEPLILENTENKLSEYLKEAKIYFPSRDDPECVEICYKDTDCLAPEGYLSSTIMNFYIRYLQQQASLTNSSLSDYHFFNTYFYKKLKEAVSCKQSDRETIFVKFRRWWKGVNIFQKAYVLIPIHEDLHWSLIIICIPDKGDESGPIILHLDSLGLHSSQSVFDNIKSYLIEEKKYMDRDCVYSDVSIADRIWKCLSRRIEAQVITVPQQKNEYDCGLFVLYFIKRFMEEAPERLKKKDLDMFSKRWFRPEEASSLRVKIKKLLIEELQNSISHNCISESSPASSGNATEGVETAQDSLT* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2813 550 Gene3D - 275 515 - -
Lja4g2813 550 MobiDBLite consensus disorder prediction 528 550 - -
Lja4g2813 550 MobiDBLite consensus disorder prediction 153 199 - -
Lja4g2813 550 Pfam Ulp1 protease family, C-terminal catalytic domain 299 502 IPR003653 GO:0006508|GO:0008234
Lja4g2813 550 MobiDBLite consensus disorder prediction 153 175 - -
Lja4g2813 550 PANTHER UBIQUITIN-LIKE PROTEASE 4 48 537 - -
Lja4g2813 550 MobiDBLite consensus disorder prediction 29 78 - -
Lja4g2813 550 ProSiteProfiles Ubiquitin-like protease family profile. 284 477 IPR003653 GO:0006508|GO:0008234
Lja4g2813 550 MobiDBLite consensus disorder prediction 225 252 - -
Lja4g2813 550 MobiDBLite consensus disorder prediction 90 116 - -
Lja4g2813 550 Gene3D - 326 454 - -
Lja4g2813 550 SUPERFAMILY Cysteine proteinases 274 517 IPR038765 -
Lja4g2813 550 MobiDBLite consensus disorder prediction 90 109 - -
Lja4g2813 550 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 48 537 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2813 K16287 - gmx:100790705 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2813 4 47215575 47236010 Lja4g2813 4 47215575 47236010 ECH