Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2810 ATGAAAGTGGAATTAAATATGCACAATAATAACACGCACAAACAAGTAATGATCATCACTCACAGGAGCAGCCTCTTTCTCCTTATCCTTCTTCTCTCCACATTCTGTGTTGGTTTTGCTGTTGAAGATGGAGAAGCAGAAGCGCAGAAGCAAAACCCGTTCACACCAAAAGCATTCGTGATCCGCTACTGGGACAGAGCGATCTCCAACAAATTGCCAAAGTCATCCTTCCTCCTCTCCAAGGCGTCACCACTGACCGCCTCCGACGCCGCCACCTACGCCACCCTCGCCGCCGCCAACACACTTTCCACTCGCCTCCCGGAGTTCTGTTCCGCCGCGCACCTCCTCTGCTTCCCGGAGGTGTCCCCCAGCCTCGACAACCACCCAAAGGACTCCGCCTTCTCCGTCTACAACGACGGCCAGAACTTCACAAACTACGGCACCGACCGACCCGACGGCCTCGACTCCTTCAAGAACTACTCCAACGGTTTCTTCAATACTCCCGTCAACGACTTCCGCCGCTACAGCCGTGACTCCGCCGGCCACAATGAAACCTTCACCAGCTACGGCGACGGCAACAACGTCGTCGACCAGAGCTTCCACACTTACGGCACCAACACCGCCGGCGGCGCCGGCGACTTCAAATCATACGGCGCCAACTCCAACGTCCCCAACCTCGGATTCACCACCTACTCCACCGACGGAGTCGGCAGGGAGCAAAAATTCTCCCAATACAGCGAAAACGGTAACGCCGGCGACCAGAGTTTTACCAGCTACGGCAAAGAATCGCTCGGCGCCGCCAACGACTTCTCCGGCTACGGCACAAACTCCAACGTCGCCAGTTCCGGATTCTCAAACTACGCTGAGAAAGGCACCAGCGCCAAGGACACGTTCACGAACTACGGCGTGAACATGAACAACCCCACCGAGACGTTCAAGAACTACGCCAAGGACAGCGTCTTCGCAGCCGAGAAATTCTCAAACTACCGTGACCAGGCGAACGTCGGCGCCGACTCGTTCCAGTCATACGCCGAGGGCGCACGAGGCGGCGATCCGGTGGAATTCAAGAATTATGGGAAGTCATTCAATGAAGGAACCGACACTTTCAAAGGATACGCCAAAGGAGCAGACATTGATCAGAAGGTTAACTTCAAGGGCTATGGTGTCAATAACACCTTCAAAGATTACTCCAAACATGGCATTTCCTTTGCTGGTTATACCAAACGCTCATCCAAACAGAGCCTTACTGGAAATTTGGCAAAGAAATGGGTTGAACCTGGGAAGTTCTTTCGTGAGAGGATGCTGAAATCAGGGACGGTTATTCCCATGCCTGATGTAACTGACAAAATGCCCAAAAGGTCGTTTTTGCCTCGTTCCATTTTGACCAAATTGCCCTTTAAATCTTCGGATCTGAAACGCGTGTTCAGGATCTCTGATAATTCTTCCATGGATAAAATGATTGTTGATTCGGTCGGTGAGTGCGGGAGGGCACCGAGCGCGGGTGAGACCAAACGTTGCGTGGGCTCGATTGAGGACATGATTGACTTTGCCGCTTCAGTTTTGGGCCGCAACGTGACAGTTCGGGCAACCGAGAATGTTAATGGGTCGGGGAAGACCGTGATGGTGGGTCGGGTTTATGGGGTGAATGGTGGGAAAGTAACCAAGTCGATGTCGTGTCACCAGAGCTTGTTTCCTTATTTGCTTTACTACTGCCACTCGGTTCCTAAGGTTCGGGTCTATGAAGCAGATCTTTTAAACCCGGTTACAAAGGCTAAGATTAACCACGGAGTTGCCATCTGTCACTTGGACACCACTGCTTGGAGCCCCACTCATGGTGCGTTCATGGCTCTTGGGTCCGGTCCAGGTCGGATTGAAGTGTGTCACTGGATCTTTGAGAATGACATGACCTGGACAACTGCTGATTGA 1926 0.526 MKVELNMHNNNTHKQVMIITHRSSLFLLILLLSTFCVGFAVEDGEAEAQKQNPFTPKAFVIRYWDRAISNKLPKSSFLLSKASPLTASDAATYATLAAANTLSTRLPEFCSAAHLLCFPEVSPSLDNHPKDSAFSVYNDGQNFTNYGTDRPDGLDSFKNYSNGFFNTPVNDFRRYSRDSAGHNETFTSYGDGNNVVDQSFHTYGTNTAGGAGDFKSYGANSNVPNLGFTTYSTDGVGREQKFSQYSENGNAGDQSFTSYGKESLGAANDFSGYGTNSNVASSGFSNYAEKGTSAKDTFTNYGVNMNNPTETFKNYAKDSVFAAEKFSNYRDQANVGADSFQSYAEGARGGDPVEFKNYGKSFNEGTDTFKGYAKGADIDQKVNFKGYGVNNTFKDYSKHGISFAGYTKRSSKQSLTGNLAKKWVEPGKFFRERMLKSGTVIPMPDVTDKMPKRSFLPRSILTKLPFKSSDLKRVFRISDNSSMDKMIVDSVGECGRAPSAGETKRCVGSIEDMIDFAASVLGRNVTVRATENVNGSGKTVMVGRVYGVNGGKVTKSMSCHQSLFPYLLYYCHSVPKVRVYEADLLNPVTKAKINHGVAICHLDTTAWSPTHGAFMALGSGPGRIEVCHWIFENDMTWTTAD* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2810 641 Pfam BURP domain 429 638 IPR004873 -
Lja4g2810 641 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 26 641 - -
Lja4g2810 641 SMART BURP_2 427 640 IPR004873 -
Lja4g2810 641 ProSiteProfiles BURP domain profile. 429 640 IPR004873 -
Lja4g2810 641 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 26 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2810 Lja-Chr4 47138435 47140863 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2810 - - var:108321369 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2810 4 47138435 47140863 Lja4g2810 4 47138435 47140863 ECH