Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2804 ATGGCAGATGTCACCCACGATGTTCTTTCCCTTCTCTCCTCTCCCGACAAAGATTTTCTTCTTCGGAACAACGGCGATCAGGTCAAAATTGACAGCTTGAAGGGAAAGAAACTTGGTTTATATTTTTCAGCATCCTGGTGCGGCCCGTGTCGAAGTTTTACCCCAACTTTGGTGGAGGTATACAATGAAGTCTCTCAGAAAGGTGACTTTGAGGTCATTTTTGTCACGGCTGATGAAGATGATGAGTCATTTAAGAGCTACTTTTCCAAGATGCCATGGCTGGCTATCCCATTTTCTGATTCAGAGATGCGCAATCACCTTGATGAATTGTTCCATGTGAGGGGGATTCCCCATCTTGCATTACTTGATGAATCTGGGAAAGTTATCACTGAAGATGGAGTTGAGACTATCCGTGAATATGGAGTTGATGGATACCCTTTTACTTTAGCAAGGATCCAAGAGTTGAAAGATCAAGAAGAGGAAGCTAAGAGAAATCAGACCTTGAGATCTATCTTGGTCTCTCATTCCCGTGACTTTGTGATATCAGCTGATGGAAAGAAATTACTTGTCTCTGAGCTTGAGGGAAAGACAGTTGGTCTGTATTTTTGTTCAGCTTCATACAGATCATGCAGTGACTTCACTCTACAGCTTGTGGAGGTTTATGAGAAGCTAAAGGCAAAGGGGGAGAACTTTGAGGTTGTTCTGATACCCCTAGATGATGATGAAGAATCCTTCAAGGAAGAATTAGAAAGCATACCTTGGTTATCCTTGCCTTTCAAGGACAAAAGCAATGAGAAGCTAATTCGGTACTTTGAGCTCTCAACCCTCCCCACTTTGGTTATTATTGGGCCAGATGGGAAGACTCTTAATCCAAATGTTGTTGAGGCTATTGAGGAACATGGGATTGCTGCATTTCCATTCACTCCTGAAAAGTTTGCTGAGCTCATTGAAATAGAGAAGGCCAAGGAAGCAGCTCAAACCCTTGAGTCGATTTTGGTGTCTGGGGATCAAGATTATGTTCTTGGGAAAGACGGCGTGAAGGTTCCAGTGTCAGAATTAAAGGGGAAGAACATCCTTCTCTACTTCTCAGCCCACTGGTGTCCTCCGTGCCGTGCATTTCTTCCAAAACTCATTGATGCATATCATAAGATCAAGGCAAAGGACAATCCATTTGAAGTCGTTTTCATCTCAAGCGACAGGGATCAAGCCTCCTTTGATGAATTCTTTGCGGGAATGCCATGGCTGGCACTTCCATTTGGTGACTCAAGGAAGGCGCTCCTGAGTCGCAAATTCAAGGTATCTGGCATCCCCATGCTTGTGGCCATTGGATCAAGTGGCCGGACTGTCACAAAAGAAGCTCGAGATTTGGTTGCGCTTTATGGGGCAGATGCTTATCCTTTCACTGAGGAGAGAATAGAAGAAATTGAGGCTGGAAATGAAGAAACTGTAAAGGGGTGGCCTGAGAAGGTGATACATGAAACACATGAACATGAGCTCATGTTGACACGCCGCAGGATTTATTATTGCGATGAATGTGGAGATGAGGGACATATATGGTCATACTACTGTGAAGAGTGTGACTTTGATCTACATCCAAAATGTGCTTCGGTGGACAAAGGAAGCAAGGGTGACGATACCAAGGAAGAAGAAATTTCCAAAGATGGATGGGTTTGTGATGGAGAAGTCTGTTCTAAAGCCTGA 1701 0.4397 MADVTHDVLSLLSSPDKDFLLRNNGDQVKIDSLKGKKLGLYFSASWCGPCRSFTPTLVEVYNEVSQKGDFEVIFVTADEDDESFKSYFSKMPWLAIPFSDSEMRNHLDELFHVRGIPHLALLDESGKVITEDGVETIREYGVDGYPFTLARIQELKDQEEEAKRNQTLRSILVSHSRDFVISADGKKLLVSELEGKTVGLYFCSASYRSCSDFTLQLVEVYEKLKAKGENFEVVLIPLDDDEESFKEELESIPWLSLPFKDKSNEKLIRYFELSTLPTLVIIGPDGKTLNPNVVEAIEEHGIAAFPFTPEKFAELIEIEKAKEAAQTLESILVSGDQDYVLGKDGVKVPVSELKGKNILLYFSAHWCPPCRAFLPKLIDAYHKIKAKDNPFEVVFISSDRDQASFDEFFAGMPWLALPFGDSRKALLSRKFKVSGIPMLVAIGSSGRTVTKEARDLVALYGADAYPFTEERIEEIEAGNEETVKGWPEKVIHETHEHELMLTRRRIYYCDECGDEGHIWSYYCEECDFDLHPKCASVDKGSKGDDTKEEEISKDGWVCDGEVCSKA* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2804 566 PANTHER NUCLEOREDOXIN 1-2-RELATED 3 535 - -
Lja4g2804 566 Gene3D Glutaredoxin 318 468 - -
Lja4g2804 566 Gene3D Glutaredoxin 170 308 - -
Lja4g2804 566 Gene3D Glutaredoxin 12 148 - -
Lja4g2804 566 SUPERFAMILY Thioredoxin-like 181 289 IPR036249 -
Lja4g2804 566 Pfam Thioredoxin-like 356 447 IPR012336 -
Lja4g2804 566 Pfam Thioredoxin-like 195 287 IPR012336 -
Lja4g2804 566 Pfam Thioredoxin-like 36 128 IPR012336 -
Lja4g2804 566 ProSitePatterns Thioredoxin family active site. 359 377 IPR017937 -
Lja4g2804 566 SUPERFAMILY Thioredoxin-like 21 129 IPR036249 -
Lja4g2804 566 PANTHER THIOREDOXIN 3 535 - -
Lja4g2804 566 SUPERFAMILY Cysteine-rich domain 486 537 IPR046349 -
Lja4g2804 566 ProSiteProfiles Thioredoxin domain profile. 8 161 IPR013766 -
Lja4g2804 566 ProSiteProfiles Thioredoxin domain profile. 317 477 IPR013766 -
Lja4g2804 566 CDD TryX_like_TryX_NRX 18 147 IPR045870 GO:0004791
Lja4g2804 566 SUPERFAMILY Thioredoxin-like 341 450 IPR036249 -
Lja4g2804 566 Coils Coil 149 169 - -
Lja4g2804 566 CDD TryX_like_TryX_NRX 338 467 IPR045870 GO:0004791
Lja4g2804 566 Pfam C1 domain 494 535 IPR004146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2804 Lja-Chr4 46699452 46702668 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2804 K17609 - gmx:100809224 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2804 4 46699452 46702668 Lja4g2804 4 46699452 46702668 ECH