Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2802 ATGGATTCCAGAGAGGTTCAAACTGAAGTGAATTCGGATCCTAATCGAGAAATTCATGTATATCATCTGGCTTTGGATATTGGGGGATCTCTTGCCAAGTTAGTATACTTCACGAAAGATGGTGATCATTTTGTTGATGGTGAGGAGGGGATCTCGCCTAGAAAGGCGTTGGAGACATCCAATGGCAGTAGGAACCATCCTGTTCTTAATGGGAGGCTCAATTTTAAGAAGTTTGAAACAAGCAAGATAAATGATTGTTTAGATTTTATCAAGACCATGAAACTTCATCTTGGAGGCAGTCAGCAGCATGAAAATCCTGGAAGTCAACCAATAACTATTAAGGCCACAGGTGGTGGTGCATACAAATTTGCAGACCTCTTCAAGGAAAGATTGGGGATAGTTCTTGACAAGGAAGATGAAATGGATTGTCTTGTTGCAGGAGCGAATTTTCTTCTCGAGGTGGTTCACCGGGAAGCATTCACCTATATGGGTGATCAAAAGCAATTTGTGGAGATTGACCAAAATGATCTGTATCCCTATCTTCTTGTTAATATTGGCTCTGGTGTTGGCATGATCAAGGTGGAAGGAGATGGAAAGTTTGAGCGAGTTAGTGGAACAAGTATAGGTGGAGGCACTTTCTGGGGTTTAGGACGGCTTTTAACTCAGTGCAAGAGTTTTGATGAGTTGCTGGAATTAAGTTATCGGGGAAACAACAGAGCGGTTGATATGCTTGTTGGAGATATTTATGGTGGAATGGACTATGCAAAGATAGGTCTTTCATCAACGGCAATAGCCTCTAGTTTTGGAAAGGCCATTTCTGACAATAAGGAGCGTGAAGATTACAAACCTGAAGACATGGCTCGATCTCTTCTAAGAATGATCTCAAATAATATCGGACAGATCTCTTACTTAAATGCCGTTCGATTTGGGCTTAAGAGGATATTTTTCGGTGGATTTTTTATTCGGAGGCATCCTTTCACAATGGATACCCTCTCTGTTGCTGTTAATTTCTGGTCTAAAGGTGAGGCACAAGCAATGTTCTTGCGGCATGAAGGGTTTCTTGGAGCTATGGGTGCCTTCATGAGATCTGACAAACATGGCCTCAAGGAATTATTGGTTAATCAAGTGGCGCAACAAACTCCCACCAAGTTTTCCTTTGCTGTTGATAAAATACATGGTCCAGTAGATGGGGAATTAAATGGAGATGAAAGTATAGAGTGCAGTGTGTATGCAGCCTAG 1239 0.4173 MDSREVQTEVNSDPNREIHVYHLALDIGGSLAKLVYFTKDGDHFVDGEEGISPRKALETSNGSRNHPVLNGRLNFKKFETSKINDCLDFIKTMKLHLGGSQQHENPGSQPITIKATGGGAYKFADLFKERLGIVLDKEDEMDCLVAGANFLLEVVHREAFTYMGDQKQFVEIDQNDLYPYLLVNIGSGVGMIKVEGDGKFERVSGTSIGGGTFWGLGRLLTQCKSFDELLELSYRGNNRAVDMLVGDIYGGMDYAKIGLSSTAIASSFGKAISDNKEREDYKPEDMARSLLRMISNNIGQISYLNAVRFGLKRIFFGGFFIRRHPFTMDTLSVAVNFWSKGEAQAMFLRHEGFLGAMGAFMRSDKHGLKELLVNQVAQQTPTKFSFAVDKIHGPVDGELNGDESIECSVYAA* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2802 412 TIGRFAM panK_eukar: pantothenate kinase 22 361 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lja4g2802 412 Gene3D - 240 352 - -
Lja4g2802 412 Pfam Fumble 22 361 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lja4g2802 412 SUPERFAMILY Actin-like ATPase domain 21 157 IPR043129 -
Lja4g2802 412 SUPERFAMILY Actin-like ATPase domain 130 361 IPR043129 -
Lja4g2802 412 Gene3D - 15 171 - -
Lja4g2802 412 PANTHER PANTOTHENATE KINASE 4 412 - -
Lja4g2802 412 PANTHER PANTOTHENATE KINASE 4 412 IPR004567 GO:0004594|GO:0005524|GO:0015937
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2802 Lja-Chr4 46666260 46676624 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2802 K09680 - gmx:100782208 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2802 4 46666260 46676624 Lja4g2802 4 46666260 46676624 ECH