Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2735 ATGAAGGGTGAGGAGGGGAACAAGAGGTACATCAGCTCTGAGGAGTTGAAGGAGCACAACAAGCAAGGAGATCTGTGGATATCAATTCAGGGTAAGGTTTACAATGTCTCTGATTGGGCCAAGGATCACCCTGGTGGTGAGGTTCCCCTTTTGAATCTTGCTGGCCAGGATGTCACTGATGCATTCATTGCATACCATCCTGGCTCAGCATGGCAATATCTTGACAAATTCTTCACCGGGTATCACCTCAACGATTTCCAAGTCTCTGAGGTATCCAGGGATTACAGGAAACTCGTGACCGAGTTTGTCAAATTGGGGCTTTTTGAGAAGAAAGAGCATGTCACCTTATACACCCTCACCTCTGTTGCTGTTATGTTTTCCATTGTTGTTTATGCCGTCCTCAGATGCACAAGCGTGTGGGCTCATTTGGGCTCTGCCATGTTGCTGGGTTTGCTTTGGATGCAGAGCACTTATGTGGGTCATGATTCTGGTCACTATGAGGTTATGTCGAGTCGCGGTTACAACAAATTAGCCCAAGTTTTGTGTGGGAATTGTATGACTGGGATAAGCATTGCCTGGTGGAAATGGACTCACAATGCTCATCACATTGCCTGTAACAGTCTTGACTATGATCCTGATCTGCAGCATATCCCTGTTTTTGCTGTATCTTCTCGTTTCTTCAGTTCCATTAGATCTTGTTTCTATGGGAGGGAGCTCAAGTTTGATGCTTTGTCAAGGTTTCTGATCAGTTTCCAGCACTGGACATTCTACCCGGTCCTGTGCTTTGCCAGGGTCAACTTGTACCTTCAGACTCTTCTGCTCTTGTTTTCAGGGCGTAAAGTCCCAGATAGAGCTTTAAACATATTGGGGATCCTTGTATTTTGGACTTGGTTCCCTCTTCTTTTGTCGTGTCTTCCAAATTGGCCAGAAAGGGTTATGTTTGTGCTAGCTTCCTTTGTTGTTTGTTCTGTTCAGCATCTGCAATTCTGTTTGAACCATTTTGCTGCAAATGTGTATGTGGGGCCACCAAAGGGGAATGACTGGTTTGAGAAGCAGACAAGTGGGACATTGGACATCTCTTGCTCATCTTGGATGGATTGGTTCTTTGGTGGTTTGCAGTTTCAGCTTGAGCATCATTTGTTCCCAAGGCTTCCAAGGGCTCAATTGAGGAAGATATCTCCATTGGTGATTGATCTTTGCAAGAAGCATAATTTGCCTTACAGGAGTTTGTCATTTGTGGAGGCCAATCTTTGGACTCTTAAGACACTCAGAACTGCTGCTCTTCAAGCAAGGAACCTCATTGATCCTTCTTCCCAGAATTTGTTGTGGGAAGCTTTCAACACTCATGGTTGA 1353 0.4508 MKGEEGNKRYISSEELKEHNKQGDLWISIQGKVYNVSDWAKDHPGGEVPLLNLAGQDVTDAFIAYHPGSAWQYLDKFFTGYHLNDFQVSEVSRDYRKLVTEFVKLGLFEKKEHVTLYTLTSVAVMFSIVVYAVLRCTSVWAHLGSAMLLGLLWMQSTYVGHDSGHYEVMSSRGYNKLAQVLCGNCMTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAVSSRFFSSIRSCFYGRELKFDALSRFLISFQHWTFYPVLCFARVNLYLQTLLLLFSGRKVPDRALNILGILVFWTWFPLLLSCLPNWPERVMFVLASFVVCSVQHLQFCLNHFAANVYVGPPKGNDWFEKQTSGTLDISCSSWMDWFFGGLQFQLEHHLFPRLPRAQLRKISPLVIDLCKKHNLPYRSLSFVEANLWTLKTLRTAALQARNLIDPSSQNLLWEAFNTHG* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2735 450 Pfam Cytochrome b5-like Heme/Steroid binding domain 13 81 IPR001199 -
Lja4g2735 450 CDD Delta6-FADS-like 143 405 - -
Lja4g2735 450 Pfam Fatty acid desaturase 139 409 IPR005804 GO:0006629
Lja4g2735 450 PANTHER FATTY ACID DESATURASE 2 5 449 IPR012171 GO:0016491
Lja4g2735 450 SMART Cyt_b5_2 11 83 IPR001199 -
Lja4g2735 450 Gene3D - 1 81 IPR036400 -
Lja4g2735 450 PANTHER FATTY ACID/SPHINGOLIPID DESATURASE 5 449 - -
Lja4g2735 450 PIRSF FA_sphingolip_des 1 438 IPR012171 GO:0016491
Lja4g2735 450 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 8 87 IPR001199 -
Lja4g2735 450 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 8 85 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2735 Lja-Chr4 42851528 42853601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2735 3 450 Lipid Metabolism Gene Families AT2G46210 72.768 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2735 K21734 - gmx:100781495 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2735 4 42851528 42853601 Lja4g2735 4 42851528 42853601 ECH