Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2715 ATGAGATCAGTGCAATTTCTAGTAGTTGATGAAGCAGCTCAATTAAAGGAATGTGAATCGACCATTCCATTGCAGCTTCCAGGTCTCCACCATTGCATCCTAATAGGTGATGAGAAACAGCTTCCAGCATTGGTTAAAAGCAGGACTGCAGATAATGCTGAATTTGGAAGAAGTTTGTTTGAGAGGTTGGTGCTCTTAGGTTACAAGAAGCATATGCTTAATGTTCAGTATCGGGTGCATCCATCCATTAGCTTATTCCCATGCAAAGAGTTTTATGATGAAAAACTTACTGATGCCCCCACTGTCAAGGGAGAAAGCTATAATAGAAGTTTCCTTGAAGGTGAAATGTTTGGTTCTTATTCTTTTATCCATATAGCAAAGGGGAAAGAACAGTTTGGTCGTGAGCACAGTTTGAAGAACCAGGTTGAAGCTGCAGTTATTTCTGAGATAATTGGAAGCCATAAAAAATTAACATTGTTCTATTTTGTTTTGCCAGAGTTTATGAGGACTAGGAAGAAAATTAGCATTGGAATTATATCTCCCTATAATTCTCAAGTTTATGAAATCCAACAGAAAATTAAGCACCACATTTCAGTTTCTGATCCTGACTTCTCTGTCAGTGTTCGTTCGGTTGATGGATTTAAAGGAGGGGAACAGGATGTTATAATAATTTCTACTGTGAGATCTAATCCTAGTGGAAAAGTGGGGTTTCTTTCCAATAGACAAAGAGCAAATGTTGCTATGACTAGGGCTAGATATAGCCTTTGGATATTAGGAAATGCGGCAACACTGGTTAGCAGTGACACAGTGTGGAAGCAGGTAGTTCTTGATGCTAAGAAAAGAGATTGTTTCCATACAGCCGATAAGGACAATAAACTGGCTCGGGTTATTGAGGATGTTGTTTTTGAGCTTCAACTACTTGAAGAATCTGAGTCGATGTTTAAGAAACTGAATCTAGGGGAGAGGTCTTCCAGGCCTCGGAAAGCAAGGAGGTGA 996 0.3936 MRSVQFLVVDEAAQLKECESTIPLQLPGLHHCILIGDEKQLPALVKSRTADNAEFGRSLFERLVLLGYKKHMLNVQYRVHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQFGREHSLKNQVEAAVISEIIGSHKKLTLFYFVLPEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFKGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTADKDNKLARVIEDVVFELQLLEESESMFKKLNLGERSSRPRKARR* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2715 331 Pfam AAA domain 56 261 IPR041679 -
Lja4g2715 331 Pfam AAA domain 4 48 IPR041677 GO:0004386
Lja4g2715 331 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 3 305 - -
Lja4g2715 331 Gene3D - 77 299 IPR027417 -
Lja4g2715 331 Gene3D - 1 76 IPR027417 -
Lja4g2715 331 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 297 IPR027417 -
Lja4g2715 331 CDD SF1_C_Upf1 80 279 IPR041679 -
Lja4g2715 331 PANTHER DNA2/NAM7 HELICASE FAMILY 3 305 IPR045055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2715 Lja-Chr4 41810758 41812210 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2715 - - lja:Lj2g3v2495730.1 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2715 4 41810758 41812210 Lja4g2715 4 41810758 41812210 ECH