Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2703 ATGGCTTCAAAGGAAAATAAGGCTAAGAAAAATCCTCATTCCAGCCCAAAGAAACAACCAGGAGGATGGAAGGCCATGCCCTATATTTTAGCGAATGAAACATTTCAGAGATTGGCAATTTTTGGGTTGGTTGCTAACTTTATGGTGTATTTAACAAGAGAGCTTCACTTGGAGCAAGTATATGCTGCTACCATTGTGAACGCATGGTTTGGGTTTTCAAACTTTGGCCCCCTACTGGGTGCCTTCATTTCTGACGCTTATGTCGGTCGCTTCAGGACTATAGCTTTTGGTTCAGTCGTTTGTCTTCTGGGGATGATGGTGGTGACTTTAACATCCTGGATGACGCCTCCACCTTGTACTCCTGAGCAACTAACACTGGGACAGTGTGTCAGAGCAAGCAATTCTCAAATGGCTGTGCTGTTTACAGGGCTTGGCATTCTAAGCATTGGTTCAGCTGGAGTGGCCCCTTGCAGCATTCCCTTTGGTGTTGACCAATTTGACCCAACCACAGATGAAGGGAAGAAAGGGATTAACAGCTTCTTCAATTGGTACTACGCCACATTCACCTTGGTATTAATTCTCACTCAGACAGCCGTGATCTATATACAAGACTCCGTGAGCTGGAAGTTAGGGTTTGGGATCCCAACTCTGTGCATGTTCTTGTCAATAATCTTCTTCTTTGTTGGAACGAGGGTCTACGTGTATGTGAAGGCTGAAGGAAGTGTTTTTTCTGGTGTGGCCCAAGTTTTTGTGGCTGCATACAAAAAGAGAAAAGTCAAGTATCCAAGTCAGGAAGAGATTAATGATGGAGTTTTCTTTGATTCCCCATTTTGTGGGACTGCTGTTTCGTCAAAACTCCCTATGACCAAACAATACAGGGTGTTGAACAAAGCTGCTATAGTAATGGAGGGTGAGCTAAATCCAGATGGAAGTAGAGTAAACAAATGGGAACTTGTGAGCATCCAGCAAGTTGAAGAAATCAAATGCATAGCTAGGATCATCCCAGTATGGGCTGCAGGTATCCTCAGTCTCACTTCCATGTCCCAACAAGGAACATTCACCGTCTCACAAGCCTTGAAAATGGAAAGACACCTTGGACCCAATTTCCAAATCCCAGCTGGTTCACTCGGAGTCATATCACTACTCACCATTGCTTTATGGATCCCACTCTATGACCGGTTCCTAGTACCAGCACTGAGAAAAAAAACCAAGCATGAAGGTGGCATCAGTCTCCTCCTAAGAATGGGAATTGGCATGGTGTTCTCTGTTCTATCAATGGTTGTGGCTGGCTCGGTTGAAAAAGTAAGAAGGGATTCAGCAGTTTCAAATTCAAATGCTCCAATCTCAGTTTTCTGGCTTGCTCCTCAGTTGATCCTTATGGGTTTCTTTGAGGCCTTCAATATAATTGCCCAAATTGAGTTTTTTAACCGGCAATTTCCCGAGCACATGAGAAGCATTGGTAATTCCTTGGTATCATTATCTTTTGGTGTGTCGAGCTACGTGAGCAGCATTATAATCAACACAGTTCATCATACTACTGGAACACATGACCACCAAGATTGGTTGACGAATGATATAAACGCTGGCAGAGTAGACTACTTTTATTACCTCATAGCCGGGATAACCACCCTTAACTTGATTTATTTTATATATGTCGCAAGAGGATATCAATACAAGGGGAGTGTGCAGGTTGACCTCCATGACCATGATGATGTGGAGTTAGGATCACTCAAAGGCTAG 1740 0.4362 MASKENKAKKNPHSSPKKQPGGWKAMPYILANETFQRLAIFGLVANFMVYLTRELHLEQVYAATIVNAWFGFSNFGPLLGAFISDAYVGRFRTIAFGSVVCLLGMMVVTLTSWMTPPPCTPEQLTLGQCVRASNSQMAVLFTGLGILSIGSAGVAPCSIPFGVDQFDPTTDEGKKGINSFFNWYYATFTLVLILTQTAVIYIQDSVSWKLGFGIPTLCMFLSIIFFFVGTRVYVYVKAEGSVFSGVAQVFVAAYKKRKVKYPSQEEINDGVFFDSPFCGTAVSSKLPMTKQYRVLNKAAIVMEGELNPDGSRVNKWELVSIQQVEEIKCIARIIPVWAAGILSLTSMSQQGTFTVSQALKMERHLGPNFQIPAGSLGVISLLTIALWIPLYDRFLVPALRKKTKHEGGISLLLRMGIGMVFSVLSMVVAGSVEKVRRDSAVSNSNAPISVFWLAPQLILMGFFEAFNIIAQIEFFNRQFPEHMRSIGNSLVSLSFGVSSYVSSIIINTVHHTTGTHDHQDWLTNDINAGRVDYFYYLIAGITTLNLIYFIYVARGYQYKGSVQVDLHDHDDVELGSLKG* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2703 579 CDD MFS_NPF1_2 26 556 - -
Lja4g2703 579 PANTHER PEPTIDE/NITRATE TRANSPORTER 11 567 - -
Lja4g2703 579 MobiDBLite consensus disorder prediction 1 20 - -
Lja4g2703 579 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 80 104 IPR018456 GO:0006857|GO:0016020|GO:0022857
Lja4g2703 579 Pfam POT family 91 518 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja4g2703 579 SUPERFAMILY MFS general substrate transporter 15 555 IPR036259 -
Lja4g2703 579 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 567 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja4g2703 579 Gene3D MFS general substrate transporter like domains 2 565 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2703 Lja-Chr4 40039569 40044754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2703 17 578 Organic Solute Cotransporters AT1G69870 56.446 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2703 - - gmx:100809657 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2703 4 40039569 40044754 Lja4g2703 4 40039569 40044754 ECH