Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2674 ATGGCACTCTCCTTCCTTCGAATCCCCGGTAACTGCTGCATTCCATACACCAACCTGCAACCTTTCCCTTCCAAAAATATCCTCCGCAAGACCACGGTGGTGGCGGCGGCGGCGGAGCTCCAAGCGCCGATGGGGCTGGCGGGTGGAACCGATTACGAGTTTCCAGGTGGTAATGTTCCAACCCATAAGGTTACAGTCCACGATAGACAACGAGGAGTTGTTCACGAGTTCTCAGTGCCTGAGGACCAGTATATATTACATACTGCTGAATCCCAGAACATTAACCTTCCATTCGCCTGCAGGCATGGTTGTTGTACTAGCTGTGCTGTGCGGATCAAGAATGGACAGATTAAACAGCCACAGGCACTTGGGATATCTGCCGAGTTGAGAGAGAAGGGTTATGCACTTCTTTGTGTCAGCTTCCCAACATCAGACGTTGAAGTAGAAACTCAAGATGAAGATGAGGTATATTGGCTTCAATTTGGACGTTATTTTGCCCGAGGACCGGTGGAAAGAGATGACTATGCCTTGGAGTTGGCCATGGGTGACGAGTGA 555 0.5027 MALSFLRIPGNCCIPYTNLQPFPSKNILRKTTVVAAAAELQAPMGLAGGTDYEFPGGNVPTHKVTVHDRQRGVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELREKGYALLCVSFPTSDVEVETQDEDEVYWLQFGRYFARGPVERDDYALELAMGDE* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2674 184 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 62 157 IPR010241 GO:0009055|GO:0022900|GO:0051537
Lja4g2674 184 SUPERFAMILY 2Fe-2S ferredoxin-like 58 162 IPR036010 GO:0051536
Lja4g2674 184 CDD fer2 64 149 IPR001041 GO:0051536
Lja4g2674 184 PANTHER FERREDOXIN 29 169 - -
Lja4g2674 184 Pfam 2Fe-2S iron-sulfur cluster binding domain 72 143 IPR001041 GO:0051536
Lja4g2674 184 Gene3D - 59 164 IPR012675 -
Lja4g2674 184 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 62 154 IPR001041 GO:0051536
Lja4g2674 184 PANTHER FERREDOXIN C 2, CHLOROPLASTIC 29 169 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2674 K02639 - gmx:100791128 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2674 4 36668076 36679086 Lja4g2674 4 36668076 36679086 ECH