Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2669 ATGGTTCCTAAAGTTCTTGCTGGTTTTGAAACGGCAATGGCTGAGAATGAGAGTGGAAGAATCATTGGGAATTGGAAGAAACGTGTGCATGTTTTCTGTGAGAAGTTGAGAAGGTTCCCAAGTTTGGCTTGGAAGACTACATGGAAGGTGGGACATGATGACCCAAGAAGGGTGATCCATGCATTCAAAGTGGGTTTGTCTCTGACTCTTGTGTCTTTGTTGTATCTGTTGGAGCCACTCTTCAAAGGGATTGGCCAGAATGCTATTTGGGCTGTCATGACGGTCGTGGTGGTGTTTGAGTTTACCGCAGGGGCAACTTTATGCAAAGGGCTCAACAGAGGATTGGGGACACTAATAGCAGGATTATTGGCTTTTCTTATTAAGTGTGTGGCAAATGCATCTAGTCAGATTGTTCAAGCTGTTTTCATTGGAGCTGCAGTTTTTATAGTAGGTGCTGCAGCCAGTTACATGAGGTTCTTTCCATACATAAAGAAGAATTATGATTATGGTGTGGTTATATTTCTCTTGACCTTCAACTTGTTAACGGTTTCGAGTTACCGGGTTGAGAATGTCTTGAAGATTGCACATGAACGCTTCTACACCATAGCCATAGGCTGTGCCGTTTGCCTTCTGATGAGTCTGTTGATATTTCCCAATTGGTCAGGGGAAGACCTCCATCATTCTACAGCTTTCAAGCTTGAAGGCCTAGCCAAATCTATAGAAGCTTGTGTCAATGAATACTTTTATGGAGAAATGGAAGCTTCTGGTGATATGAACTCATCTGAGGATACCATATACAAAGGTTATAAAGCAGTTTTGGATTCCAAATCTACTGATGAAACTCTGGCATTACATGCAAGTTGGGAACCAAGGCACTCAAGATACTGTCATAGATTTCCATGGCAGCAGTATGTAAAAGTTGGAACTGTTCTTCGCCAATTCGGGTACACCGTGGTAGCCCTACATGGCTGCTTGAGAACAGAAATTCAGACCCCACAATCTGTTCGAGTTCTATTCAAGGACCCTTGCATCAGGCTAGCAGCAGAGGTATCAAAAGCACTTACAGAACTCGCCAACAGCATAAGAAGCCGCCGCCATTGCTCCCCGGAGATTCTCTCCGATCACCTCCAAGAAGCCTTACAGGACCTCAACACCGCGTTAAAATCACAACCGCGCCTCTTCTTAGGCTCCAACGACAGCCAAGCCAACAACATGCTCGCCATTGCAGCAGCAACAACAACACAGACAAACACAAAGGGGTCGATTTCAAGCGTGAAAACCGATTCCTCTGCATTGCTGGATTGGAAAACCAAAAGGGGTTGTTCCATGTCGGGTGAACAGGGAAAGGAAGCAGAACGCAAGGTGCTGAGATCGCAGATGAGTAAACTCGCCATCACGAGCCTTGAATTCTCTGAAGCTTTGCCTTTTGCTGCATTTGCGTCTTTGCTTGTGGAAACGGTGGCGAAGCTTGATCTTGTTATTGAGGAAGTTGAAGAGTTGGGGAGGTTGGGTTGCTTCAAGGAGTATAGAGATGGTGATGAGTTTTCTTGTTTGGTTAGTCATCTGTGGATGGCATCTTGTATCCCAAACTCTCTATCTTTCCAAGGGAGGAAGACAAGCCCAAATTGCTTATTCGGTTGGAACATAGGCAGAAAAGGAGTTGCTGACAACAAACCTCAGATTAACTACCATGACATTGATCTCACTTTCTCAACTTCTCTGGTTGACAAAACATTCTTAAAAGGGAAGGAGCTGAAATGCTGCTACAGAGCTACAATTGATGGATTCAGTGCAGCTGATTTCCACAATTGCTGTGACTTCAAGGGTCCATGTGTGATAATTGGCTACACAAACAAAAATTTCAAGTTTGGTGCATTCAACCCTGAAGGTTATAGGAGCACTGATGACTACTATGATACATTTGATCCCTTTCTATTTTATTGGGCAGACATTGAAGCTGAACCCATCGTTTTACCCAAGGTTGGTGGAAGTGGTGCAGCCCTGTTTGATTATGCTCGCGGCGGGCCGCAGTTTGGGGCCGATGGGCTTCTTATTGGGCCTCCATTAGCTCCGGTTATGGGTGGTTTTGCAGGGCCTGATACCAATTCTGGGATTGGTGACTTGAGACAAGCTAAGTCTAGATTGGGACTGTCTTATGCTAAGAGGGAGGATGGTAAGGAGTCTATTTTTGGTGATGAGTCAAGGGCAGTTCTGCAAGAAGTGGAAGTGTTTTGCAGTCCCAAAATTGCAAGCTTATACTAG 2262 0.4487 MVPKVLAGFETAMAENESGRIIGNWKKRVHVFCEKLRRFPSLAWKTTWKVGHDDPRRVIHAFKVGLSLTLVSLLYLLEPLFKGIGQNAIWAVMTVVVVFEFTAGATLCKGLNRGLGTLIAGLLAFLIKCVANASSQIVQAVFIGAAVFIVGAAASYMRFFPYIKKNYDYGVVIFLLTFNLLTVSSYRVENVLKIAHERFYTIAIGCAVCLLMSLLIFPNWSGEDLHHSTAFKLEGLAKSIEACVNEYFYGEMEASGDMNSSEDTIYKGYKAVLDSKSTDETLALHASWEPRHSRYCHRFPWQQYVKVGTVLRQFGYTVVALHGCLRTEIQTPQSVRVLFKDPCIRLAAEVSKALTELANSIRSRRHCSPEILSDHLQEALQDLNTALKSQPRLFLGSNDSQANNMLAIAAATTTQTNTKGSISSVKTDSSALLDWKTKRGCSMSGEQGKEAERKVLRSQMSKLAITSLEFSEALPFAAFASLLVETVAKLDLVIEEVEELGRLGCFKEYRDGDEFSCLVSHLWMASCIPNSLSFQGRKTSPNCLFGWNIGRKGVADNKPQINYHDIDLTFSTSLVDKTFLKGKELKCCYRATIDGFSAADFHNCCDFKGPCVIIGYTNKNFKFGAFNPEGYRSTDDYYDTFDPFLFYWADIEAEPIVLPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTNSGIGDLRQAKSRLGLSYAKREDGKESIFGDESRAVLQEVEVFCSPKIASLY* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2669 753 Pfam Aluminium activated malate transporter 48 501 IPR020966 GO:0015743
Lja4g2669 753 Pfam TLD 588 679 IPR006571 -
Lja4g2669 753 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 513 - -
Lja4g2669 753 ProSiteProfiles TLDc domain profile. 560 747 IPR006571 -
Lja4g2669 753 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2669 Lja-Chr4 36493480 36501283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2669 34 517 Miscellaneous Gene Families AT4G17970 64.516 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2669 - - gmx:100819748 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2669 4 36493480 36501283 Lja4g2669 4 36493480 36501283 ECH