Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2655 ATGGGTTCTAAAAACATCACACCAGGCCAACGAGCACGAAGGCCGTTGTCAATATTTGTTGTGCTTGGTCTGTGCTGTTTCTTTTATCTTTTGGGAGCATGGCAGAGAAATGGTTTTGGGAAGGGAGATAACCTTGCGTTGAAAGTAAATAAGGTGATTACAAACACAGACTGCAATATTGTCTCCAATTTGGATTTTGAAGCACATCACCATATTGTGGAAGTTGTTGAACGTTCTGAACCAAAAGCTAAAGTGTTCAAGCCATGTGATGTAAAATATGCTGATTACACTCCTTGCCAAGAGCAAGACCGAGCAATGACATTCCCTAGAGAAGATATGATCTATAGGGAAAGACATTGTCCACCTGAGAAGGAAAAATTGCACTGCCTCATTCCAGCACCCAAGGGGTACACCACTCCTTTTCCCTGGCCTAAAAGCCGTGATTACGCATACTATGCTAATGTTCCCTACAAGCACCTGACTGTGGAGAAGGCTGTTCAAAACTGGGTGAAATTCCAGGGAAATGTGTTTAAATTTCCAGGTGGAGGTACCATGTTCCCTCACGGAGCGGATGCATATATTGATGAACTGGCATCAGTTATTCCTATTGCAAATGGTTCTATCAGAACAGCACTGGACACTGGTTGTGGAGTTGCAAGCTGGGGAGCCTATTTGTTGAAGAGAAATGTGCTGGCTATGTCCTTTGCTCCAAAGGACAACCACGAAGCGCAAGTTCAGTTTGCACTAGAACGAGGGGTACCTGCCGTTATTGGTGTTCTTGGTACCATCCATCTCCCATACCCATCCAGAGCATTTGATATGGCCCAGTGTTCTCGATGTTTAATACCATGGGCTGCAAATGAGGGCAAGTATCTAATGGAAGTTGATCGAGTTTTAAGGCCCGGTGGTTACTGGATTCTGTCTGGCCCTCCAATTAATTGGAAAACGTACTACCAAACATGGCAGCGATCTAAGGAGGATGTGAAAGCAGAGCAGAGAAATATTGAGGAGTTAGCTGAAAGTCTTTGCTGGGAAAAGAAGTATGAAAAAGGTGATATTGCTATTTGGAGGAAGAAATTAAATGCTAAATCCTGTCAAAGAAAATCTCCCAAGTTATGTGAGGTCGATAATGCTGATGATGTATGGTACAAAAAGATGGAAGTCTGTAAAACCCCTTTCCCTGAGGTAACCAGTAAAAGTGAAGTTGCTGGAGGGGAATTGAAGAAATTTCCTGCTAGGCTTTTCGCAGTCCCTCCGCGTATAGCTAAGGGCACTATTGATGGCGTTACAGCTGAATCTTATCAAGAGGACAACAAGTTGTGGAAAAAGCATGTTAACACTTATAAAAGAATTAATGCAAATATTGGCACTGCTAGATATCGGAATATAATGGACATGAATGCAGGCCTTGGCGGATTTGCAGCTACACTTGAATCACAGAAGTCTTGGGTGATGAATGTCGTGCCCACAATAGCTCAGAATACTTTAGGTGTTGTCTTTGAAAGAGGTTTGATTGGCATTTATCATGACTGGTGTGAAGGATTTTCTACATACCCTAGGACTTATGATCTTATTCATGCTAATGATTTGTTTAGCTTGTACCAGGGCACGTGCAACCTGGAAGACATCCTTCTAGAGATGGATCGCATCCTGAGGCCGGAAGGAGTAGTCATCATCCGGGATGAAGTTGATGTCCTTATCAAGGTCAAGAAAATTATTGGGGGGATGAGATGGGATACCAAAATGGTAGATCATGAGGATGGCCCCTTTGTGCCTCGGAAGATATTGGTTGCTGTGAAGCAGTATTGGGTTGGAAGTGGTAAAAACACCACCTCCAATGAGGAATAA 1848 0.4324 MGSKNITPGQRARRPLSIFVVLGLCCFFYLLGAWQRNGFGKGDNLALKVNKVITNTDCNIVSNLDFEAHHHIVEVVERSEPKAKVFKPCDVKYADYTPCQEQDRAMTFPREDMIYRERHCPPEKEKLHCLIPAPKGYTTPFPWPKSRDYAYYANVPYKHLTVEKAVQNWVKFQGNVFKFPGGGTMFPHGADAYIDELASVIPIANGSIRTALDTGCGVASWGAYLLKRNVLAMSFAPKDNHEAQVQFALERGVPAVIGVLGTIHLPYPSRAFDMAQCSRCLIPWAANEGKYLMEVDRVLRPGGYWILSGPPINWKTYYQTWQRSKEDVKAEQRNIEELAESLCWEKKYEKGDIAIWRKKLNAKSCQRKSPKLCEVDNADDVWYKKMEVCKTPFPEVTSKSEVAGGELKKFPARLFAVPPRIAKGTIDGVTAESYQEDNKLWKKHVNTYKRINANIGTARYRNIMDMNAGLGGFAATLESQKSWVMNVVPTIAQNTLGVVFERGLIGIYHDWCEGFSTYPRTYDLIHANDLFSLYQGTCNLEDILLEMDRILRPEGVVIIRDEVDVLIKVKKIIGGMRWDTKMVDHEDGPFVPRKILVAVKQYWVGSGKNTTSNEE* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2655 615 Gene3D Vaccinia Virus protein VP39 191 378 IPR029063 -
Lja4g2655 615 PANTHER METHYLTRANSFERASE PMT14-RELATED 8 608 - -
Lja4g2655 615 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 447 562 IPR029063 -
Lja4g2655 615 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 324 IPR029063 -
Lja4g2655 615 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 95 600 IPR004159 GO:0008168
Lja4g2655 615 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 8 608 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2655 Lja-Chr4 35965242 35971200 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2655 - - gmx:100810763 1132.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2655 4 35965242 35971200 Lja4g2655 4 35965242 35971200 ECH