Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2540 ATGAAAACGGAAGAAGCCATGGCTGAGTTGGAGCGAGTCCAAACCCACCTCCTCCAACGCATCTCAAAGCTCGAGCATTCTCTTCTCACCGACGACCCTAACACTCACACTGACACTAACACTGACGACACCGTCGCTCGCCTTTCTTCCATTCTGCGCACCAACGGCGTCGACGACTTCTCCTTCAAGAGGGTCCCATCCGACTACTACGATTCGCCGCTCGAAGTCCGCCGCGATGCCCTCGCCGCCGCCTCCATTCACCACCTCTGCAAGAGCATCGTTCTGGTCAACACGCAAGCCCCATCAAACGTTGTTGATTGCAGCGATCGGAAAAATTCAAAGTACTATGTTGTTATTGTTCAGTACACTGCTCGGTTCAATGCTGAGGCTGTGAAGAGCTTTCTGTTCTCGCTCAACAATGGAAGTATAGCCAAGAAGAAATTCAATTTGAGGCTAGCTCCTGAGGAGACATCAACGGAGTTAACTGGATTTGGGCACAATGCAGTGACTTGTGTCGGCATGAAAACAGACATTCCGGTGATTCTGGATGAAGCTATTGTAAAACTAACTCCAGATTTCTTTTGGTTGGGTGGCGGTGAGGTTGATCTGAAGCTAGGGATCCGAACATCTCAATTAATCAGATTTATCAACCCATTCATCGTCAATTGTAGCAGTGGTTGA 681 0.4905 MKTEEAMAELERVQTHLLQRISKLEHSLLTDDPNTHTDTNTDDTVARLSSILRTNGVDDFSFKRVPSDYYDSPLEVRRDALAAASIHHLCKSIVLVNTQAPSNVVDCSDRKNSKYYVVIVQYTARFNAEAVKSFLFSLNNGSIAKKKFNLRLAPEETSTELTGFGHNAVTCVGMKTDIPVILDEAIVKLTPDFFWLGGGEVDLKLGIRTSQLIRFINPFIVNCSSG* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2540 226 SUPERFAMILY YbaK/ProRS associated domain 60 223 IPR036754 GO:0002161
Lja4g2540 226 Pfam Aminoacyl-tRNA editing domain 86 215 IPR007214 GO:0002161
Lja4g2540 226 PANTHER YBAK/AMINOACYL-TRNA SYNTHETASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 7 224 - -
Lja4g2540 226 Gene3D - 42 224 IPR036754 GO:0002161
Lja4g2540 226 PANTHER UNCHARACTERIZED 7 224 - -
Lja4g2540 226 CDD YbaK_like 79 221 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2540 - - var:108338253 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2540 4 32196303 32199997 Lja4g2540 4 32196303 32199997 ECH