Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2528 ATGGCCTCCAAAACTTGTTCCTCCCTTGCTGTTTTCCTCACACTCAACCTCATCTTCTTTTCACTAGTCTCTGCTTGTAATAGTGGATGCCCTGGTCCAAACCCAAAGCCCAAGCCCAGCCCAAGCCCAAAGCCAAAGCCAAACCCCAACCCTAGCCCATCTTCAGGTGGTTCATGCCCCCGTGACGCTCTCAAACTAGGCGTGTGTGCCAATGTGCTAAATGGGTTGTTGAACGTGACATTGGGTCAACCACCAGTGACACCGTGCTGCACCCTCCTCGACGGTCTTGTTGATCTTGAAGCTGCTGTCTGCCTCTGCACTGCCCTAAAAGCTAACATTTTGGGCATCAACCTCAACCTTCCCATCTCACTCAGCTTGCTCCTCAACGTTTGCTCAAAGAAAGTCCCACGTGACTTCCAATGCGCCTAA 429 0.5175 MASKTCSSLAVFLTLNLIFFSLVSACNSGCPGPNPKPKPSPSPKPKPNPNPSPSSGGSCPRDALKLGVCANVLNGLLNVTLGQPPVTPCCTLLDGLVDLEAAVCLCTALKANILGINLNLPISLSLLLNVCSKKVPRDFQCA* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2528 142 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 61 141 IPR036312 -
Lja4g2528 142 CDD HPS_like 59 141 IPR027923 -
Lja4g2528 142 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Lja4g2528 142 Gene3D - 58 142 IPR036312 -
Lja4g2528 142 SMART aai_6 59 141 IPR016140 -
Lja4g2528 142 MobiDBLite consensus disorder prediction 33 59 - -
Lja4g2528 142 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 7 142 - -
Lja4g2528 142 MobiDBLite consensus disorder prediction 33 54 - -
Lja4g2528 142 Pfam Hydrophobic seed protein 59 142 IPR027923 -
Lja4g2528 142 PANTHER - 7 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2528 Lja-Chr4 31675724 31676653 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2528 50 141 Acyl Lipid Metabolism Gene Families AT4G22490 39.785 1.43e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2528 - - gmx:100801985 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2528 4 31675724 31676653 Lja4g2528 4 31675724 31676653 ECH