Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2492 ATGGCTGATATCTTTGCGTGGCTCTTCTCCTTCTTCGTCCTTATTGGCTTAATTGTTCTCAACGTTTACCAGTTAATGTGTCTGGCAGACCTTGAATTTGATTACATAAATCCTTATGATTCCGCATCTCGAATAAACAAAGTGGTTTTGCCTGAGTATATTACAGTAGGTGTCCTGCTCTGCTTCTACGTTGTAACAGGGCATTGGATAATGTCACTGTTCTGCCTTCCTTACCTCTACTACAATGTGAGATTGTACAGACAGGGAAAACATCTAGTTGATGTTACAGAGATTTTCAACTTGCTTCCTTGGGAAAAGAAGCAACGGCTTTTCAAGCTCTTCTATGTTATTTTTATGCTTTTCCTCTCCTTATTTTGGTTGATATACACATCACTGGATGACCAAGATAACTAG 414 0.3913 MADIFAWLFSFFVLIGLIVLNVYQLMCLADLEFDYINPYDSASRINKVVLPEYITVGVLLCFYVVTGHWIMSLFCLPYLYYNVRLYRQGKHLVDVTEIFNLLPWEKKQRLFKLFYVIFMLFLSLFWLIYTSLDDQDN* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2492 137 PANTHER CORNICHON FAMILY PROTEIN 1 135 - -
Lja4g2492 137 PANTHER CORNICHON-RELATED 1 135 - -
Lja4g2492 137 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
Lja4g2492 137 SMART Cornichon_2 4 125 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2492 Lja-Chr4 30307656 30311607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2492 K20368 - gmx:100306019 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2492 4 30307656 30311607 Lja4g2492 4 30307656 30311607 ECH
Lja4g2492 4 30307656 30311607 Lja2g0063 2 495997 498393 PCT