Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2458 ATGGGGTTCCCAGCCAACGGTGGTGCTTCCGGCGAGAAGCCTCTCAAGTTCCTCATCTACGGCCGCACCGGATGGATTGGCGGCCTGCTGGGAAGCCTATGCCGAGCCCAGGGGATCGATTTCGAATACGGCTCCGGCCGCCTCGAGAACCGCGCCTCCCTGGAAACTGACATCGCGGAGGTGAAGCCAACTCACGTGTTCAACGCCGCCGGTGTCACTGGTCGCCCCAACGTGGACTGGTGTGAGACTAACAAGGTCGAGACCATCCGCGCCAACGTGGTTGGCACGCTCACGCTTGCTGATGTGTGCCGTGAGCGCGGAATCATCGTCGTCAACTTCGCCACCGGCTGCATCTTCGAGTACGATTCCGGTCATCCCCTCGGATCTGGTATCGGATTCAAGGAAGAGGATTCTCCTAATTTCATCGGTTCGTTCTACTCCAAAACCAAAGCCATGGTTGAAGATCTACTGAGGAATTATGATAATGTGTGTACCTTGCGAGTGAGGATGCCGATCTCATCAGATTTATCAAACCCGCGCAATTTCATCACGAAGATCTCTCGCTACGAGAAGGTGGTGGACATTCCAAATTCAATGACAATCCTGGACGAGCTTCTTCCCATCTCGATTGAGATGGCGAAGAGGAATCTCACTGGGATCTGGAACTTCACAAACCCTGGAGTGGTGAGCCACAATGAGATCTTAGCAATGTACAAGGAGTATATTGACTCAAACTTCACCTGGAAGAATTTCACCCTTGAGGAACAGGCCAAGGTCATTGTTGCTCCCCGGAGCAACAATGAGCTTGATGCAGGGAAATTGAGCAAGGAGTTTCCAGAATTGTTGCCCATTAAGGAGTCACTCATTAAGTATGTCTTCAAGCCAAACCAGAAGGTTAAGGCTTAA 906 0.5199 MGFPANGGASGEKPLKFLIYGRTGWIGGLLGSLCRAQGIDFEYGSGRLENRASLETDIAEVKPTHVFNAAGVTGRPNVDWCETNKVETIRANVVGTLTLADVCRERGIIVVNFATGCIFEYDSGHPLGSGIGFKEEDSPNFIGSFYSKTKAMVEDLLRNYDNVCTLRVRMPISSDLSNPRNFITKISRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILAMYKEYIDSNFTWKNFTLEEQAKVIVAPRSNNELDAGKLSKEFPELLPIKESLIKYVFKPNQKVKA* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2458 301 Pfam RmlD substrate binding domain 16 188 IPR029903 -
Lja4g2458 301 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 8 297 - -
Lja4g2458 301 CDD dTDP_HR_like_SDR_e 16 288 - -
Lja4g2458 301 Gene3D - 7 301 - -
Lja4g2458 301 PANTHER BNAC05G13120D PROTEIN 8 297 - -
Lja4g2458 301 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 276 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2458 Lja-Chr4 28713407 28715036 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2458 K12451 - cit:102628237 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2458 4 28713407 28715036 Lja4g2458 4 28713407 28715036 ECH
Lja4g2458 4 28713407 28715036 Lja4g2458 4 28713407 28715036 PCT