Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2406 ATGAACTCTCGGGAAGCTACTCTGGTGGCGACGGCAACTGCGTTTGGTGCCTTGGCCTCCGCCATCGCTCTCCGCTTCTTCTTCAACCGTTCCCGACGGCAACCATCCAGAACCAATTTCTCGCAAAACGGCACCGTTTCCACTCCTCCGGACCCTTTCGACCCCTCCAGGCGCCATGGGTACTTGTCGTGGGATGATTATTTCATGGCAATTGCATTTTTGTCAGCTGAAAGATCCAAAGACCCTAACAGGCAGGTGGGGGCTTGTTTGGTGAGTCAAGATGGTATAATTCTTGGCATTGGTTATAATGGATTTCCAAGGGGTTGTTCTGATGACAAGCTACCCTGGGCCAAGAAATCTAGGACTGGAAATCCTTTGGAGACTAAGTACCCTTATGTTTGTCATGCAGAAGTAAATGCTATTCTTAACACAAATCATGCCTCAGCTGCTGGACAACGGCTATATGTGACCATGTTTCCTTGCAATGAATGTGCTAAGATCATAATCCAGTCAGGAGTTTCCGAAGTCATTTATTTTGTGGAGAAGAGATTAGATAATCCAGATATTGCATATATTGCCTCTCACAAGCTACTTTCATTGGCTGGTGTTAAGGTCAGGAAACATCAACCACTGATGAATGAAATTCATCTGAAGTTTGACGAGCACTAG 669 0.4604 MNSREATLVATATAFGALASAIALRFFFNRSRRQPSRTNFSQNGTVSTPPDPFDPSRRHGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDKLPWAKKSRTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFVEKRLDNPDIAYIASHKLLSLAGVKVRKHQPLMNEIHLKFDEH* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2406 222 CDD deoxycytidylate_deaminase 65 194 IPR035105 -
Lja4g2406 222 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 1 222 IPR015517 -
Lja4g2406 222 MobiDBLite consensus disorder prediction 35 55 - -
Lja4g2406 222 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 135 168 IPR016192 GO:0008270|GO:0016787
Lja4g2406 222 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 63 179 IPR002125 -
Lja4g2406 222 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 1 222 - -
Lja4g2406 222 Gene3D Cytidine Deaminase, domain 2 55 222 - -
Lja4g2406 222 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 63 205 IPR002125 -
Lja4g2406 222 SUPERFAMILY Cytidine deaminase-like 65 211 IPR016193 GO:0003824
Lja4g2406 222 MobiDBLite consensus disorder prediction 35 50 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2406 K01493 - gmx:100792003 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2406 4 27006123 27009791 Lja4g2406 4 27006123 27009791 ECH