Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2400 ATGGCGTTACAAGAGAACCTTGTTTGGAACGTCATTCTGGTGCTAACAGCAGCGTGTTTCATCCACTTCAACATACTTTTCGCCCATGCTCATGCTCATGCTAATGGATTTGGAGACCAACCACTCTCCAGAATCGCCATTCACAACACGGTTGTTTCGCTCCATGGTGGCGCCTCCGTTAAAGCCTCCCCTTCTATTCTTGGCCTTCAGGGTGAGGATACACAATGGGTCACTCTAGATATTGATTACCCTGATCCATCTGCAGATGATTGGTTGGGAGTTTTCTCTCCTGCAAATTTCAACTCTTCAACTTGTCCTCCTGTAAATGATCCAAAGGAACAGACTCCGTATATATGCACAGCCCCAATAAAGTACAAGTTTGTGAATTACTCCGACCCGCAATATACGAAGACGGGGAAAGCTTCTTTCAAGTTGCAGTTGATCAATCAACGCGCAGATTTCTCTTTTGCGCTGTTTTCAGGAGGACTTCAGAATCCTAAACTTGTATCAGTTTCCAATTCCATATCATTTGTCAATCCTAATGCACCTCTGTATCCACGTCTTGCTCAAGGGAAGTCTTGGGATGAAATGACAGTTACCTGGACAAGTGGATACAACATAAATGATGCTACACCATTCGTTGAGTGGGGTCTTGAGGGAAAATTTCCAGTGCAGTCACCTGCTGGAACATTGACATTTGGTCGCAGCAGCATGTGTGGTTCACCTGCAAGTACCGTTGGTTGGCGTGACCCTGGTTTCATACACACAAGTTTCCTAAAAAATCTGTGGCCAAATTCAGTGTATTCATACCGATTAGGGCATCGTTTATCTAATGGTTTATATATTTGGAGCAAGAAATATTCATTCAAGTCATCACCTTATCCTGGACAGGACTCACTGCAGCGTGTTGTCATATTTGGTGACATGGGGAAGGCCGAGCGTGATGGATCAAACGAGTATAGTGACTATCAACCTGGTTCACTTAACACCACTGATCACCTCATCAAGGATTTAGAAAATATTGACATTGTTTTCCACATAGGAGATATAACATATGCAAACGGTTATATCTCACAGTGGGACCAATTCACAGCTCAAGTGGAACCAATTGCATCAACAGTGCCATATATGATCGCCAGTGGAAATCATGAACGTGATTGGCCCAACACAGGATCATTTTATAACACTACAGATTCAGGTGGCGAATGTGGAGTTTTGGCCGAGACCATGTTTTATGTTCCAGCTGAAAACAGAGCAAAATTTTGGTACGCCACGGATTATGGCATGTTTCGCTTCTGTATAGCTGACACTGAACATGATTGGAGGGAAGGATCTGAACAGTACAAATTCATTGAGCATTGCCTTGCAACAGTAGACAGACAAAAACAACCGTGGTTGATCTTTGCTGCTCATCGTGTGCTTGGATATTCCTCTGACTTTTACTATGGGGCGGAAGGGTCATTTGAAGAGCCCATGGGAAGGGAAAGTTTGCAGAAACTTTGGCAGAGATACAAAGTAGATATTGGATTTTATGGCCATGTCCATAACTACGAACGGACATGCCCCGTTTATCAGAACAAATGTGTAAATACAGAGAAGTCTCACTATTCTGGCATTGTAAATGGAACAATTCATGTTGTTGCTGGAGGGGCAGGGAGCCATTTGTCAAGATTCAGCGAAAAAACCCCAGAGTGGAGCCTTGTCAGAGATTACGACTTTGGGTTTGTCAAGTTGACTGCATTCAATCATTCATCTCTCCTCTTTGAGTACAAGAAAAGCAGTGATGGAAATGTCTACGATTCTTTCACCATTTCAAGGTCTTACAAAGATGTTTTGGCATGTGTGCATGATGGTTGTGAAGCTACCACTTTAGCAAGTTAA 1881 0.4317 MALQENLVWNVILVLTAACFIHFNILFAHAHAHANGFGDQPLSRIAIHNTVVSLHGGASVKASPSILGLQGEDTQWVTLDIDYPDPSADDWLGVFSPANFNSSTCPPVNDPKEQTPYICTAPIKYKFVNYSDPQYTKTGKASFKLQLINQRADFSFALFSGGLQNPKLVSVSNSISFVNPNAPLYPRLAQGKSWDEMTVTWTSGYNINDATPFVEWGLEGKFPVQSPAGTLTFGRSSMCGSPASTVGWRDPGFIHTSFLKNLWPNSVYSYRLGHRLSNGLYIWSKKYSFKSSPYPGQDSLQRVVIFGDMGKAERDGSNEYSDYQPGSLNTTDHLIKDLENIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIASGNHERDWPNTGSFYNTTDSGGECGVLAETMFYVPAENRAKFWYATDYGMFRFCIADTEHDWREGSEQYKFIEHCLATVDRQKQPWLIFAAHRVLGYSSDFYYGAEGSFEEPMGRESLQKLWQRYKVDIGFYGHVHNYERTCPVYQNKCVNTEKSHYSGIVNGTIHVVAGGAGSHLSRFSEKTPEWSLVRDYDFGFVKLTAFNHSSLLFEYKKSSDGNVYDSFTISRSYKDVLACVHDGCEATTLAS* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2400 626 Pfam Calcineurin-like phosphoesterase 302 517 IPR004843 GO:0016787
Lja4g2400 626 Gene3D - 296 610 IPR029052 -
Lja4g2400 626 CDD MPP_PAPs 301 606 IPR041792 -
Lja4g2400 626 SUPERFAMILY Metallo-dependent phosphatases 301 608 IPR029052 -
Lja4g2400 626 Pfam Fn3-like domain from Purple Acid Phosphatase 60 179 IPR040974 -
Lja4g2400 626 Pfam Iron/zinc purple acid phosphatase-like protein C 542 601 IPR025733 -
Lja4g2400 626 PANTHER PURPLE ACID PHOSPHATASE-RELATED 20 625 - -
Lja4g2400 626 PANTHER PURPLE ACID PHOSPHATASE 20 625 - -
Lja4g2400 626 Gene3D - 182 295 - -
Lja4g2400 626 Pfam Purple acid Phosphatase, N-terminal domain 188 290 IPR015914 GO:0003993|GO:0046872
Lja4g2400 626 SUPERFAMILY Purple acid phosphatase, N-terminal domain 161 293 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2400 Lja-Chr4 26892980 26898765 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2400 51 626 Miscellaneous Gene Families AT2G03450 29.905 2.34e-63 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2400 K22390 - gmx:100814531 1084.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2400 4 26892980 26898765 Lja4g2400 4 26892980 26898765 ECH