Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2395 ATGGCGGATCCGATCCCGGCGCCGCACAGATCCGCCACGGACTTCTTCTCCGATCCACTCGACGCTCACCCGCTGTGGTTCAAACCGGCGTCGTTCCTCTCTCCGGACTTCGATTCCGAATCCTACATTTCGGAACTCCGAACCTTCGTCCCCTTCGACACTCTCCGTTCGGAACTCAACAACTACCTCTCCTCCCTCAACCACGAACTCATCGATCTCATCAACCGCGACTACGCCGATTTCGTCAACCTCAGCACCAAGCTCGTCGACGTCGACGCCGCCGTCGTGCGGATGCGCGCCCCGCTTGTGGAACTCAGAGAGAAGATCGAGCAGTTCAGAGGATCTGTTGAAGTTTCGCTTGTCGCCATTGAGAATGGTTTGAAGCAAAGGTCTGAAGCTGCCTCCGCGAGAGAGACTCTGGAGCTTCTCCTTGATACATTTCACGTCGTTTCGAAGGTTGAGAAACTAATTAAGGAGCTGCCTAGTGTGCCGTCCGACTCGTCAAATGGAGATGTAAATTTGTCGGAGAGAAGTCTATTGAGCAATGGGTTTTCTGCGCAGCATGTTGAGAATGGGACAAGTATCAGAGAGACGCAAAGCATGCTGCTGGAAAGAATTGCCAGTGAGATGAACCGGCTAAAGTTCTATGTTACCCATGCAAAGAACCTTCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGCCTAACAGTAGATGCAAGCTTGGGTCATTGCTTTGCAGATGGTCTAGAGCATCGGGATGCTACTGCAATTTACAATTGCTTGCGTGCATATGCTGCTATTGATAACACCAATAATGCAGAAGAAATATTTCGAATTAATGTTGTGGCTCCATTGATACAGAAGATTATCCCACATGGGCCCTCAGCTGTGGTTGCTGGATCATTTGGGGATGGGCTTGAAAATGATTATCAATTAATTAAAGAGTGCATTGATAAAGACTGTAAATTTTTATTGGAAATTTCTTCAGCTGAAAATTCAGGTTTACATGTCTTTGATTTCTTAGCCAATTCAATCCTTAAAGAGGTTCTCTATGCTATTCAAAAGGGGAAACCAGGTGCATTTTCTCCTGGAAGACCAACAGAGTTCTTGAAAAATTACAAATCAAGCTTAGAGTTCTTGGCTTATCTAGAAGACCACTGTCCATCCAGATCTGCCGTTGCAAAATTTCGATCTGAAGCAATATATACTGAGTTCATGAAACAATGGAATATCGGAGTGTATTTCTCTCTGAGGTTTCAAGAAATAGCAGGGTCTCTAGATTCTGTGCTCACATCATCCAGTCTTGTCCCTGTTCAAAATTTAGACCCTGGCGAATCAAATAATCAATATTTAACATTGACTCAAAGTGTCACTCTGTTGGAGAGTTTGAAATCTTGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGTTCTGACAAGTTCCTTCGCCTATGCTTGCAGCTTCTTGCTAGATACTCAAATTGGCTGTCATCTGGACTGACTGCCCGCAAGAACCATAACACGAACACTAACACTAGGGGTGAATGGGCTGTTTCGGCTGTCATAGATGACTTAATTTTGGTTATTCATGATATAAGGTGTTTAGTGGAGCTGGTTCGTGGTGATTACCTACAGCATGTGCTTCAGCTCTTATCTTCATGCTCCCCTGATGTTCTTGAATCAGTAAGGCAGAGCATTTTACAGGGTGCACAATCATTGAAATCCATAGAACCTTTAGTCATCAAAGCAGTGGTGGAGTCACTGGTGGAAAAATCAGTTGAGGACTTGAGACAGATGAAGGGGATAACAGCAACTTACAGACTGACTAATAAACAACCTATCAAGCATTCACAATATGTTTCTGGGGTATTACGCCCCCTTAAGGTTTTTTTGGATGGGGAGAGAACCATGAGATATTTAGCAAGCGAAACAAAGAATGAAATACTCCTTTGTGCTGCAACTGAGATTACTGACCGATATTATGAATTAGCAGCTGACCTTGTTAGCGTGACAAGAAAGACAGAGTCTTCACTCCAAAAAATGAGGCAGAGTGCGCAAAGACGAGCTGGAGCAAGTTCAGATATCTCAGATAATTATGTGTCTGACACTGACAAAATTTGTATGCAGTTATTCCTTGATATTCAGGAGTACGGCCGTAACCTCTCTGCGCTAGGGGTTGAAGCAGTCAATATTGCATCCTACTGTTCATTATGGCAGTGTGTGGCTCCTGTGGATAAGAAAAACTCAATTAACCTCTAA 2265 0.4402 MADPIPAPHRSATDFFSDPLDAHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELNNYLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLVELREKIEQFRGSVEVSLVAIENGLKQRSEAASARETLELLLDTFHVVSKVEKLIKELPSVPSDSSNGDVNLSERSLLSNGFSAQHVENGTSIRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASLTVDASLGHCFADGLEHRDATAIYNCLRAYAAIDNTNNAEEIFRINVVAPLIQKIIPHGPSAVVAGSFGDGLENDYQLIKECIDKDCKFLLEISSAENSGLHVFDFLANSILKEVLYAIQKGKPGAFSPGRPTEFLKNYKSSLEFLAYLEDHCPSRSAVAKFRSEAIYTEFMKQWNIGVYFSLRFQEIAGSLDSVLTSSSLVPVQNLDPGESNNQYLTLTQSVTLLESLKSCWREDVLVLSCSDKFLRLCLQLLARYSNWLSSGLTARKNHNTNTNTRGEWAVSAVIDDLILVIHDIRCLVELVRGDYLQHVLQLLSSCSPDVLESVRQSILQGAQSLKSIEPLVIKAVVESLVEKSVEDLRQMKGITATYRLTNKQPIKHSQYVSGVLRPLKVFLDGERTMRYLASETKNEILLCAATEITDRYYELAADLVSVTRKTESSLQKMRQSAQRRAGASSDISDNYVSDTDKICMQLFLDIQEYGRNLSALGVEAVNIASYCSLWQCVAPVDKKNSINL* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2395 754 Pfam COG (conserved oligomeric Golgi) complex component, COG2 25 156 IPR024602 -
Lja4g2395 754 Pfam COG complex component, COG2, C-terminal 589 716 IPR024603 -
Lja4g2395 754 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 8 753 IPR009316 GO:0007030|GO:0015031|GO:0016020
Lja4g2395 754 PANTHER BNAA01G14200D PROTEIN 8 753 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2395 K20289 - gmx:100817096 1279.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2395 4 26822832 26831246 Lja4g2395 4 26822832 26831246 ECH