Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2387 ATGGCGAACTCGAACTTGGAAGATGTTCCCTCTGTGGATCTCATGACCGAGCTTCTCCGGCGGCTGAAGTGCTCTTCCAAGCCTGACAAGCGTCTCATCCTCATTGGCCCACCTGGATCTGGAAAAGGCACCCAGTCTCCAATCATAAAGGACGAGTACTGCTTATGCCACTTAGCTACTGGTGATATGTTAAGAGCAGCTGTAGCAGCTAAAACCCCTCTTGGCATTAAGGCTAAAGAAGCTATGGAAAAGGGAGAACTTGTTTCTGATGACTTAGTTGTTGGCATTATAGATGAAGCAATGAAGAAGCCATCTTGTCAGAAAGGTTTCATTCTAGATGGTTTTCCTAGAACTGTGGTCCAAGCTCAGAAGCTTGATGAGATGCTGGGAAAACAGGGACTTAAAGTTGATAAGGTGCTCAATTTTGCGATTGATGATGCAATCCTTGAGGAGAGAATTACTGGTCGCTGGATACATCCATCCAGTGGAAGAACCTACCATACAAAATTTGCTCCTCCTAAGGCCCCTGGCGTTGATGATGTTAGTGGTGAACCTCTGATCCAGCGCAAGGATGACACTGCAGCTGTTCTTAAGTCAAGACTGGAGGCATTTCATAAGCAAACTGAACCGGTTATTGATTACTATTCAAAGCAGAGTTTGGTTGCTAATCTTCATGCTGAGAAGCCTCCCAAAGAGGTGACAGTTGAAGTCGAGAAAGTGTTGTCTCAATAG 732 0.4536 MANSNLEDVPSVDLMTELLRRLKCSSKPDKRLILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMEKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLGKQGLKVDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKAPGVDDVSGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKQSLVANLHAEKPPKEVTVEVEKVLSQ* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2387 243 CDD ADK 31 233 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja4g2387 243 TIGRFAM adk: adenylate kinase 31 241 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lja4g2387 243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 239 IPR027417 -
Lja4g2387 243 Gene3D - 2 242 IPR027417 -
Lja4g2387 243 PANTHER NUCLEOTIDE KINASE 8 242 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja4g2387 243 PANTHER ADENYLATE KINASE 3 8 242 - -
Lja4g2387 243 Pfam Adenylate kinase 34 219 - -
Lja4g2387 243 ProSitePatterns Adenylate kinase signature. 110 121 IPR033690 -
Lja4g2387 243 Pfam Adenylate kinase, active site lid 156 191 IPR007862 GO:0004017
Lja4g2387 243 Hamap Adenylate kinase [adk]. 30 242 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja4g2387 243 PRINTS Adenylate kinase signature 33 46 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja4g2387 243 PRINTS Adenylate kinase signature 61 75 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja4g2387 243 PRINTS Adenylate kinase signature 206 220 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja4g2387 243 PRINTS Adenylate kinase signature 189 204 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja4g2387 243 PRINTS Adenylate kinase signature 110 126 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2387 Lja-Chr4 26737761 26743091 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2387 K00939 - gmx:100790268 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2387 4 26737761 26743091 Lja4g2387 4 26737761 26743091 ECH