Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2384 ATGGACCTGGGTTATGGCTATCCCCCACAAGCAGTGGCAGGGAAAAAGATCGACTCTAGCTATGATGTGCCAGAAGGAGTGGACATTAGGGGAAGATACGATGCAGAGTTTGCTAAAATTCTCACAAAAGATGCTTTGAAATTCGTTGCTGACCTGCAACGTGAGTTCAGAAACCACATCAAGTATGCGCTTGAGTGCAGAAAAGAAGCAAAGAGGAGGTACAATGAAGGGGCTGTACCAGGGTTTGATCCGGCCACAAGGTGCATAAGAGAAGGGGAGTGGCTGTGTGCACCAGTTCCAGCAGCTGTTTGTGATAGGAAAGTGGAGATCACTGGCCCTGTAGAGAGAAAGATGGTCATCAATGCTCTTAACTCTGGAGCTAAAGTCTTCATGGCTGATTTTGAAGATGCACTCTCTCCCAGCTGGGAGAATCTTATGAGAGGCCAAGTGAACTTGAAGGATGCTGTGTCTGGGACCATAAGTTTCCATGACAAGAACAGAAACAGAGTTTACAAGCTCAATGATCAGATAGCTAAACTATTTGTGAGGCCAAGAGGTTGGCACTTACCTGAGGCTCATATTCTGATCGATGGTGAACCTGCAACTGGTTGCCTTGTTGATTTTGGCCTCTACTTCTACCACAATCACTCAACCTTCAGGCGTACTCAAGGTGCTGGGTTTGGCCCTTTCTTCTATCTCCCCAAAATGGAGCATTCAAGGGAAGCTAAGATATGGAACAATGTGTTTGAGAGGGCAGAGAAGATGGCACGCATTGAAAGAGGAAGCATTAGGGCCACTGTCCTAATTGAAACACTTCCTGCTGTGTTTCAAATGGATGAAATTCTGTATGAGCTCAGGGAGCACTCTGTGGGTCTCAACTGTGGGCGCTGGGATTACATTTTCAGTTATGTTAAGACCTTCCAGGCTCACCCAGATCGCTTGCTGCCAGATAGAGTCCTGGTTGGCATGACTCAACACTTCATGAGGAGCTACTCTGATCTTCTCATAAGAACATGCCATAGGCGCGGCGTGCACGCTATGGGAGGAATGGCAGCACAGATTCCAATCAGAGATGATCCAGCAGCTAATGAGGCAGCAGTGGAACTGGTAAGGAAGGACAAACTCAGAGAAGTGAAGGCAGGGCATGATGGAACCTGGGCTGCACACCCTGGCCTAATCCCAACTTGCATGGAGGTTTTCAACTCCAACATGGGCACTGCTCCCAATCAGATAAAAACAATGAAACGTGATGATGCTGCAAGCATAACTGAAGAAGACCTCTTGCAGATACCGAGAGGAGCCCGCACGATGGACGGTCTTCGCCTGAACACACGGGTCGGGATACAGTATGTCGCGGCGTGGCTAACCGGAGCTGGCTCAGTGCCTCTCTACAACCTCATGGAGGATGCTGCCACTGCTGAGATTAGCAGGGTGCAGAACTGGCAGTGGATCAAGTATGGAGTTGAGCTGAATGGGGATGGGGTTGGAGTGAAGGTGAATAAAGAGCTCTTTGGCAGAGTGGTTGAAGAGGAGATGGCTAGGATTGAAAGAGAGGTGGGCAAAGAGAAGTTCAAGAAGGGAATGTACAAGGAAGCTTGCAAGATTTTTACAAGGCAATGCACATCCCTTGCACTAGATGATTTTCTCACTCTGGATGCCTATAATTCTATAGTCATGCATCATCCCAGGGAACAGTCAAAGCTTTGA 1707 0.4815 MDLGYGYPPQAVAGKKIDSSYDVPEGVDIRGRYDAEFAKILTKDALKFVADLQREFRNHIKYALECRKEAKRRYNEGAVPGFDPATRCIREGEWLCAPVPAAVCDRKVEITGPVERKMVINALNSGAKVFMADFEDALSPSWENLMRGQVNLKDAVSGTISFHDKNRNRVYKLNDQIAKLFVRPRGWHLPEAHILIDGEPATGCLVDFGLYFYHNHSTFRRTQGAGFGPFFYLPKMEHSREAKIWNNVFERAEKMARIERGSIRATVLIETLPAVFQMDEILYELREHSVGLNCGRWDYIFSYVKTFQAHPDRLLPDRVLVGMTQHFMRSYSDLLIRTCHRRGVHAMGGMAAQIPIRDDPAANEAAVELVRKDKLREVKAGHDGTWAAHPGLIPTCMEVFNSNMGTAPNQIKTMKRDDAASITEEDLLQIPRGARTMDGLRLNTRVGIQYVAAWLTGAGSVPLYNLMEDAATAEISRVQNWQWIKYGVELNGDGVGVKVNKELFGRVVEEEMARIEREVGKEKFKKGMYKEACKIFTRQCTSLALDDFLTLDAYNSIVMHHPREQSKL* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2384 568 TIGRFAM malate_syn_A: malate synthase A 40 557 IPR006252 GO:0004474|GO:0006097
Lja4g2384 568 CDD malate_synt_A 40 558 IPR006252 GO:0004474|GO:0006097
Lja4g2384 568 Gene3D Malate synthase, domain III 434 558 IPR044856 -
Lja4g2384 568 PANTHER MALATE SYNTHASE 19 568 - -
Lja4g2384 568 SUPERFAMILY Malate synthase G 19 558 IPR011076 GO:0003824
Lja4g2384 568 PANTHER MALATE SYNTHASE 19 568 IPR006252 GO:0004474|GO:0006097
Lja4g2384 568 PIRSF Malate_synth 18 559 IPR006252 GO:0004474|GO:0006097
Lja4g2384 568 ProSitePatterns Malate synthase signature. 286 301 IPR019830 GO:0004474|GO:0006097
Lja4g2384 568 Pfam Malate synthase 28 558 IPR001465 GO:0004474|GO:0006097
Lja4g2384 568 Gene3D Malate synthase, domain 3 23 433 IPR046363 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2384 K01638 - gmx:732628 1045.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2384 4 26714294 26718022 Lja4g2384 4 26714294 26718022 ECH