Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2375 ATGTTACCTCCTCGAATTCCAATCGATCTGAACGACATGAAGGAGAATCTCTCCTTTCAGTTACGCCCTTGGCAACGCTCCTTCCAGTTCTGGGTGCGAGCCATTGATATCTACACTGGATACAAGGTGTTTCAAGTGAGGGTGAATTTCGAGAAGGATGCGCAGAAGCAGGAAGCAATGTGGGAGAGACAGCACGAGCTTGCTGCTGATAAGATTTACGCCATGTGCTCTGACCTTGGTGGTTTCTTCCTCAAGATTGCTCAAATTATTGGGAAGCCCGACTTGGCTCCGGCTGCCTGGGTGAGAAGGCTTGTGACGCTGTGTGATCGTGCCCCTCCGACCACGTTTGACACCGTGAAGCTTGTGCTGGAGAATGAGCTGGGACAGGGTATTGATGATGTGTTTGAGAGGTTTGATTTGGAACCCCTTGGTTCTGCCTCGATTGCTCAGGTTCACAGAGCAAGACTGAAGGGTGACAAAGGTGATGTTGTTGTCAAGGTTCAACATCCTGGAGTTCAGGATCTGATGATGACAGATATCCATAATTTGCAAGCTTTTGCTTGGTACATGCAAAAGACAGATATCAAATTTGATCTATTTTCGGTGACAAAGGAAATGGAAAAACAGATTGGATATGAATTTGACTTCGTGAGGGAGGCTGATGCAATGGCAAGGATTAGAAAGTTCTTGTATGAACATAACAGAAGGACTCCTGTTTTGGTGCCAAGAGTAATAAGAGATATGGTTACTAGAAGGATCCTAGTTATGGAATATATGGATGGGATTCCAATAATGAACCTTGGTGATGAAATAGAAAAGAGAGGCATAAATCCACGTGGTAAGGTTGCAGCTGTAGCAAAGCAGAAAATACTTCAAAGCTTGACTCTAGCATATGGTCAAATGATTTTGAAAAGTGGATTCTTCCACGCCGATCCTCATCCAGGAAATATCCTGATTTGTAAAGGATCAGAGGTTGCCTTGCTAGACTATGGGCAGGTGAAGGATCTCCCAGAACAGTTAAGGCTTGGTTATGCTAATCTAGTTCTTGCAATTGCTGATGGTGACCCAGTAAGAGCTTCAGAAAGCTATAGGGAACTTGGTATAGAAACCTTTAGCAAATGTGAAAATGAGCTACAAGAAATGTTTAAACTAGCAGAGACAATGTTTGATACAAAATTGCCTCCTGGGGTGACAATGCTGCAACCTTTCTCTGACGAGTCTTCAATTAAAAAAATTGCTGTTCAGGCTTTTCCAGAAGAACTGTTTTCTGTACTTCGGACAGTGCATCTACTGAGAGGACTTAGCGTTGGACTTGGAATCAATTATTCCTGTGCAGAACAGTGGAGACCTATTGCTGAAGAAGCTTTGTTTCAAGCCGGCAGACTTAAAGGTAAGGATGTTAAGCCCAGAGGTAAGAAACGTGGTCTACGGAAAATGTTATTTTGGACACAGTAG 1455 0.4357 MLPPRIPIDLNDMKENLSFQLRPWQRSFQFWVRAIDIYTGYKVFQVRVNFEKDAQKQEAMWERQHELAADKIYAMCSDLGGFFLKIAQIIGKPDLAPAAWVRRLVTLCDRAPPTTFDTVKLVLENELGQGIDDVFERFDLEPLGSASIAQVHRARLKGDKGDVVVKVQHPGVQDLMMTDIHNLQAFAWYMQKTDIKFDLFSVTKEMEKQIGYEFDFVREADAMARIRKFLYEHNRRTPVLVPRVIRDMVTRRILVMEYMDGIPIMNLGDEIEKRGINPRGKVAAVAKQKILQSLTLAYGQMILKSGFFHADPHPGNILICKGSEVALLDYGQVKDLPEQLRLGYANLVLAIADGDPVRASESYRELGIETFSKCENELQEMFKLAETMFDTKLPPGVTMLQPFSDESSIKKIAVQAFPEELFSVLRTVHLLRGLSVGLGINYSCAEQWRPIAEEALFQAGRLKGKDVKPRGKKRGLRKMLFWTQ* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2375 484 PANTHER - 11 478 - -
Lja4g2375 484 Gene3D Transferase(Phosphotransferase) domain 1 133 345 - -
Lja4g2375 484 SMART serkin_6 137 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2375 484 CDD ABC1_ADCK3-like 107 362 - -
Lja4g2375 484 SUPERFAMILY Protein kinase-like (PK-like) 109 333 IPR011009 -
Lja4g2375 484 ProSiteProfiles Protein kinase domain profile. 137 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2375 484 Pfam ABC1 atypical kinase-like domain 107 359 IPR004147 -
Lja4g2375 484 PANTHER ABC1 FAMILY PROTEIN 11 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2375 Lja-Chr4 26568323 26578624 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2375 K08869 - gmx:100813009 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2375 4 26568323 26578624 Lja4g2375 4 26568323 26578624 ECH