Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2369 ATGGCTTCTTATGTGGTATCTATCTCTTCAATCACCCTCATCACCATCTGCATACTCTCCTCAGTTTTATTACCTCCTTCTGCAGCAGCAGCAACTGTGCATCAGGAGGACCCAGCAGCAAGACCCTTCAACAAGATATACGCCTTCGGCGACTCCTTCACGGACACCGGCAACACCAAGAACGCTGAAGGTCCTAGCGGCTTTGGCCATGTATCAAACTCTCCCTACGGCACCACTTTCTTCAACCATTCCACCAATAGGTACTGTGATGGAAGGCTTGTGATTGACTTTGTAACAGAATCACTTTCCTTGCCGTACCTTCAACCTTACCGTCACAGCAAAAAAAGCAATGACAGTACTTTTGGTGTGAACTTTGCTGTTGCTGGTTCCACAGCAATAAACCATATGTTCTTTGTCATGAACAACCTTTCCCTTGACATCACTCCTCAGAGCATCCAAACACAGATGCTGTGGTTTAACAGGTACCTAGAGAGCCAAAAGTGTATAGGAGTGGAATCAAAGTGTAAAGATTTTGATGACACTCTTTTTTGGTTTGGTGAGATTGGAGTCAATGACTATGCCTACACTCTTGGATCTTCAGTCTCAGGTGACACCATAAGGAAGCTTGCAATAAGCACAGTCTCAGGAGCTTTACAGACATTGCTTCAGAAGGGTGCAAAATACCTAGTTGTGCAGGGTTTGCCACTAACTGGGTGCTTGCCACTGGCTATGTATCTGGCTTCTGAAGATGACAGGGATGACATTGGATGTGTGAAAAGTGTCAACAACCAAAGCTACACTCACAACCTTGTGCTGCAAGCCAAATTACAGGAATTCAGGAAGCAGTACCCAAATGCCACCATAGTTTATGCTGATTACTGGAACGCCTACCGCGCTGTTATGAAGAATCCAAGCAAGTATGGATTCAAAGAGGTGTTTGAAGTCTGCTGTGGATCAGGAGATCCACCTTACAATTTCAGCATTTTCGCCACATGCGGCACGCCTAATGCCACGGTTTGCACAAGCCCTTCCCAACACATTAACTGGGATGGTGTTCATCTCACAGAAGCCATGTATAAGGCTGTTTCTGAAATGTTTCTTCAAGGAAACTTCACCCAACCTCCTTTTAATTTTTTGTTGGAAAGAAAACAGAGTCAGGGGTGA 1164 0.451 MASYVVSISSITLITICILSSVLLPPSAAAATVHQEDPAARPFNKIYAFGDSFTDTGNTKNAEGPSGFGHVSNSPYGTTFFNHSTNRYCDGRLVIDFVTESLSLPYLQPYRHSKKSNDSTFGVNFAVAGSTAINHMFFVMNNLSLDITPQSIQTQMLWFNRYLESQKCIGVESKCKDFDDTLFWFGEIGVNDYAYTLGSSVSGDTIRKLAISTVSGALQTLLQKGAKYLVVQGLPLTGCLPLAMYLASEDDRDDIGCVKSVNNQSYTHNLVLQAKLQEFRKQYPNATIVYADYWNAYRAVMKNPSKYGFKEVFEVCCGSGDPPYNFSIFATCGTPNATVCTSPSQHINWDGVHLTEAMYKAVSEMFLQGNFTQPPFNFLLERKQSQG* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2369 387 Pfam GDSL-like Lipase/Acylhydrolase 46 364 IPR001087 GO:0016788
Lja4g2369 387 CDD SGNH_plant_lipase_like 46 370 IPR035669 -
Lja4g2369 387 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 12 385 - -
Lja4g2369 387 PANTHER LIPASE/HYDROLASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 12 385 - -
Lja4g2369 387 SUPERFAMILY SGNH hydrolase 45 367 - -
Lja4g2369 387 Gene3D SGNH hydrolase 31 370 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2369 Lja-Chr4 26523099 26524987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2369 23 369 Acyl Lipid Metabolism Gene Families AT4G10950 26.536 2.30e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2369 - - lja:Lj4g3v1389220.1 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2369 4 26523099 26524987 Lja4g2369 4 26523099 26524987 ECH